Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AL512360.1-201ENST00000555346 234 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 MED28P6-201ENST00000558776 231 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 AC105224.1-201ENST00000587055 421 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.66□□□□□ -1.82
NPAS1Q99742 AC006116.10-201ENST00000591836 581 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 AC023043.4-201ENST00000612081 449 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
NPAS1Q99742 AC112484.5-201ENST00000624189 228 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.66□□□□□ -1.82
NPAS1Q99742 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
NPAS1Q99742 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.66□□□□□ -1.82
NPAS1Q99742 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.65□□□□□ -1.82
NPAS1Q99742 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
NPAS1Q99742 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
NPAS1Q99742 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NPAS1Q99742 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NPAS1Q99742 DEFB108F-201ENST00000344638 222 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 SNORA31-201ENST00000362607 130 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 RNU6-511P-201ENST00000363496 107 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 RNU6-108P-201ENST00000365558 107 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
NPAS1Q99742 RNU6-701P-201ENST00000384059 107 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 MIR1-2-201ENST00000384961 85 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 RNU2-71P-201ENST00000411395 189 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.65□□□□□ -1.83
NPAS1Q99742 AC108032.1-201ENST00000416706 207 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.65□□□□□ -1.83
NPAS1Q99742 OR2AS1P-201ENST00000427827 319 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 ELOCP14-201ENST00000428070 331 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.65□□□□□ -1.83
NPAS1Q99742 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.65□□□□□ -1.83
NPAS1Q99742 UBE2V1P8-201ENST00000437166 265 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 ELOCP7-201ENST00000439968 331 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.65□□□□□ -1.83
NPAS1Q99742 RPL23AP20-201ENST00000447965 421 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 ANP32BP2-201ENST00000454525 545 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.65□□□□□ -1.83
NPAS1Q99742 RPL7L1P8-201ENST00000469911 741 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 HSPE1P6-201ENST00000479457 291 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 AC092451.1-201ENST00000480211 153 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 AC092989.1-201ENST00000481235 277 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 RN7SL432P-201ENST00000484057 298 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 RPL31P13-201ENST00000484151 370 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 RPL29P14-201ENST00000495837 428 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.65□□□□□ -1.83
NPAS1Q99742 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NPAS1Q99742 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.65□□□□□ -1.83
NPAS1Q99742 AL359273.1-201ENST00000510918 627 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.65□□□□□ -1.83
NPAS1Q99742 SNORA31.22-201ENST00000517204 135 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.65□□□□□ -1.83
NPAS1Q99742 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NPAS1Q99742 AL355836.1-201ENST00000555951 870 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 AC007224.1-201ENST00000564410 144 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.65□□□□□ -1.83
NPAS1Q99742 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.65□□□□□ -1.83
NPAS1Q99742 AC055876.1-202ENST00000567053 138 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NPAS1Q99742 AL391646.1-201ENST00000603860 190 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 AC092954.2-201ENST00000609103 430 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 AP005264.7-201ENST00000625003 745 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 AL773545.4-201ENST00000637262 310 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 AL513478.4-201ENST00000641636 310 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.65□□□□□ -1.83
NPAS1Q99742 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NPAS1Q99742 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NPAS1Q99742 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.65□□□□□ -1.83
NPAS1Q99742 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NPAS1Q99742 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NPAS1Q99742 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NPAS1Q99742 CR848007.1-201ENST00000442354 1699 ntBASIC3.65□□□□□ -1.83
NPAS1Q99742 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NPAS1Q99742 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NPAS1Q99742 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPAS1Q99742 AC006971.1-201ENST00000407916 4486 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NPAS1Q99742 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.64□□□□□ -1.83
NPAS1Q99742 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPAS1Q99742 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPAS1Q99742 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NPAS1Q99742 RNU6-1120P-201ENST00000362988 108 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 RNA5SP399-201ENST00000364003 117 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 RNU6-188P-201ENST00000364207 107 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPAS1Q99742 MIR558-201ENST00000384920 94 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 AC009237.5-201ENST00000414271 501 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.64□□□□□ -1.83
NPAS1Q99742 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.64□□□□□ -1.83
NPAS1Q99742 AC018630.2-202ENST00000422992 927 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 MTCO2P19-201ENST00000427513 598 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 AC093106.2-201ENST00000428212 385 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.64□□□□□ -1.83
NPAS1Q99742 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.64□□□□□ -1.83
NPAS1Q99742 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.64□□□□□ -1.83
NPAS1Q99742 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.64□□□□□ -1.83
NPAS1Q99742 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.64□□□□□ -1.83
NPAS1Q99742 AL162151.2-201ENST00000448875 158 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms