Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 VN1R81P-201ENST00000602085 372 ntBASIC1.22□□□□□ -2.21
GAFA1Q96PS6 AL096840.1-201ENST00000603287 93 ntBASIC1.22□□□□□ -2.21
GAFA1Q96PS6 AL391813.2-201ENST00000609113 322 ntBASIC1.22□□□□□ -2.21
GAFA1Q96PS6 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
GAFA1Q96PS6 MIR6076-201ENST00000617521 113 ntBASIC1.22□□□□□ -2.21
GAFA1Q96PS6 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.22□□□□□ -2.21
GAFA1Q96PS6 AC130650.2-201ENST00000618736 2403 ntBASIC1.22□□□□□ -2.21
GAFA1Q96PS6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
GAFA1Q96PS6 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
GAFA1Q96PS6 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
GAFA1Q96PS6 AL023807.1-201ENST00000407932 359 ntBASIC1.21□□□□□ -2.22
GAFA1Q96PS6 RNU2-21P-201ENST00000410368 188 ntBASIC1.21□□□□□ -2.22
GAFA1Q96PS6 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.21□□□□□ -2.22
GAFA1Q96PS6 UBE2V1P13-201ENST00000436983 439 ntBASIC1.21□□□□□ -2.22
GAFA1Q96PS6 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.21□□□□□ -2.22
GAFA1Q96PS6 RNA5SP310-201ENST00000459084 116 ntBASIC1.21□□□□□ -2.22
GAFA1Q96PS6 AC097493.1-201ENST00000463958 372 ntBASIC1.21□□□□□ -2.22
GAFA1Q96PS6 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.21□□□□□ -2.22
GAFA1Q96PS6 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.21□□□□□ -2.22
GAFA1Q96PS6 RN7SKP219-201ENST00000516825 296 ntBASIC1.21□□□□□ -2.22
GAFA1Q96PS6 TRAV11-201ENST00000539512 339 ntBASIC1.21□□□□□ -2.22
GAFA1Q96PS6 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.21□□□□□ -2.22
GAFA1Q96PS6 HSPE1P3-201ENST00000559254 309 ntBASIC1.21□□□□□ -2.22
GAFA1Q96PS6 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
GAFA1Q96PS6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.21□□□□□ -2.22
GAFA1Q96PS6 AC092474.3-201ENST00000603022 568 ntBASIC1.21□□□□□ -2.22
GAFA1Q96PS6 AC025016.1-201ENST00000616746 682 ntBASIC1.21□□□□□ -2.22
GAFA1Q96PS6 BX649567.1-201ENST00000642071 1134 ntBASIC1.21□□□□□ -2.22
GAFA1Q96PS6 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.21□□□□□ -2.22
GAFA1Q96PS6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
GAFA1Q96PS6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.2□□□□□ -2.22
GAFA1Q96PS6 RNU6-661P-201ENST00000362409 107 ntBASIC1.2□□□□□ -2.22
GAFA1Q96PS6 RNA5SP391-201ENST00000363456 119 ntBASIC1.2□□□□□ -2.22
GAFA1Q96PS6 HMGB1P27-201ENST00000431429 603 ntBASIC1.2□□□□□ -2.22
GAFA1Q96PS6 NDUFB4P6-201ENST00000436819 366 ntBASIC1.2□□□□□ -2.22
GAFA1Q96PS6 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.2□□□□□ -2.22
GAFA1Q96PS6 RNA5SP233-201ENST00000459153 113 ntBASIC1.2□□□□□ -2.22
GAFA1Q96PS6 RPL7P18-201ENST00000478965 734 ntBASIC1.2□□□□□ -2.22
GAFA1Q96PS6 RPL30P14-201ENST00000482744 348 ntBASIC1.2□□□□□ -2.22
GAFA1Q96PS6 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.2□□□□□ -2.22
GAFA1Q96PS6 MTCO3P44-201ENST00000510977 541 ntBASIC1.2□□□□□ -2.22
GAFA1Q96PS6 OR5BM1P-201ENST00000512021 366 ntBASIC1.2□□□□□ -2.22
GAFA1Q96PS6 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.2□□□□□ -2.22
GAFA1Q96PS6 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.2□□□□□ -2.22
GAFA1Q96PS6 RN7SKP31-201ENST00000516354 278 ntBASIC1.2□□□□□ -2.22
GAFA1Q96PS6 GNAI2P1-201ENST00000541815 315 ntBASIC1.2□□□□□ -2.22
GAFA1Q96PS6 AC010928.2-201ENST00000588017 287 ntBASIC1.2□□□□□ -2.22
GAFA1Q96PS6 AL592494.3-201ENST00000609485 464 ntBASIC1.2□□□□□ -2.22
GAFA1Q96PS6 AL391834.1-201ENST00000609609 560 ntBASIC1.2□□□□□ -2.22
GAFA1Q96PS6 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.19□□□□□ -2.22
GAFA1Q96PS6 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
GAFA1Q96PS6 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
GAFA1Q96PS6 RNU6-482P-201ENST00000391068 107 ntBASIC1.19□□□□□ -2.22
GAFA1Q96PS6 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.19□□□□□ -2.22
GAFA1Q96PS6 OR51AB1P-201ENST00000429046 620 ntBASIC1.19□□□□□ -2.22
GAFA1Q96PS6 RPL23AP76-201ENST00000441860 458 ntBASIC1.19□□□□□ -2.22
GAFA1Q96PS6 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.19□□□□□ -2.22
GAFA1Q96PS6 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.19□□□□□ -2.22
GAFA1Q96PS6 AC117532.1-201ENST00000514638 323 ntBASIC1.19□□□□□ -2.22
GAFA1Q96PS6 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.19□□□□□ -2.22
GAFA1Q96PS6 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
GAFA1Q96PS6 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.19□□□□□ -2.22
GAFA1Q96PS6 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.19□□□□□ -2.22
GAFA1Q96PS6 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.19□□□□□ -2.22
GAFA1Q96PS6 AC128687.1-201ENST00000605304 619 ntBASIC1.19□□□□□ -2.22
GAFA1Q96PS6 AL136363.1-201ENST00000605349 337 ntBASIC1.19□□□□□ -2.22
GAFA1Q96PS6 AC007620.3-201ENST00000608131 497 ntBASIC1.19□□□□□ -2.22
GAFA1Q96PS6 AP001486.3-201ENST00000615334 372 ntBASIC1.19□□□□□ -2.22
GAFA1Q96PS6 AC010872.1-201ENST00000624225 675 ntBASIC1.19□□□□□ -2.22
GAFA1Q96PS6 MFSD8-245ENST00000641743 948 ntBASIC1.19□□□□□ -2.22
GAFA1Q96PS6 ZNF72P-201ENST00000425869 1908 ntBASIC1.19□□□□□ -2.22
GAFA1Q96PS6 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
GAFA1Q96PS6 MTCO1P4-201ENST00000520516 1409 ntBASIC1.18□□□□□ -2.22
GAFA1Q96PS6 RNU6-234P-201ENST00000365229 104 ntBASIC1.18□□□□□ -2.22
GAFA1Q96PS6 RNU4-62P-201ENST00000410125 130 ntBASIC1.18□□□□□ -2.22
GAFA1Q96PS6 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.18□□□□□ -2.22
GAFA1Q96PS6 RPS7P9-201ENST00000414704 586 ntBASIC1.18□□□□□ -2.22
GAFA1Q96PS6 AL356320.2-201ENST00000417263 507 ntBASIC1.18□□□□□ -2.22
GAFA1Q96PS6 AC007098.1-201ENST00000420122 367 ntBASIC1.18□□□□□ -2.22
GAFA1Q96PS6 AC108667.1-201ENST00000428618 249 ntBASIC1.18□□□□□ -2.22
GAFA1Q96PS6 SNRPGP13-201ENST00000442212 177 ntBASIC1.18□□□□□ -2.22
GAFA1Q96PS6 AC104058.1-201ENST00000448028 297 ntBASIC1.18□□□□□ -2.22
GAFA1Q96PS6 PSPHP1-201ENST00000450062 261 ntBASIC1.18□□□□□ -2.22
GAFA1Q96PS6 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.18□□□□□ -2.22
GAFA1Q96PS6 EIF4EP3-201ENST00000498782 656 ntBASIC1.18□□□□□ -2.22
GAFA1Q96PS6 COL6A4P2-205ENST00000509855 506 ntBASIC1.18□□□□□ -2.22
GAFA1Q96PS6 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
GAFA1Q96PS6 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.18□□□□□ -2.22
GAFA1Q96PS6 AC010546.1-201ENST00000569391 485 ntBASIC1.18□□□□□ -2.22
GAFA1Q96PS6 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
GAFA1Q96PS6 FAM157B-203ENST00000639350 358 ntBASIC1.18□□□□□ -2.22
GAFA1Q96PS6 ZNF37BP-203ENST00000452306 1352 ntBASIC1.18□□□□□ -2.22
GAFA1Q96PS6 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.18□□□□□ -2.22
GAFA1Q96PS6 AC011477.1-204ENST00000623416 1325 ntBASIC1.17□□□□□ -2.22
GAFA1Q96PS6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.17□□□□□ -2.22
GAFA1Q96PS6 AL354685.2-201ENST00000448218 1447 ntBASIC1.17□□□□□ -2.22
GAFA1Q96PS6 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.17□□□□□ -2.22
GAFA1Q96PS6 U8.1-201ENST00000362843 134 ntBASIC1.17□□□□□ -2.22
GAFA1Q96PS6 RPS4XP3-201ENST00000398541 413 ntBASIC1.17□□□□□ -2.22
GAFA1Q96PS6 RNU4-74P-201ENST00000411280 161 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms