Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.36□□□□□ -2.19
CFAP54Q96N23 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.36□□□□□ -2.19
CFAP54Q96N23 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.36□□□□□ -2.19
CFAP54Q96N23 AL590095.2-201ENST00000604136 117 ntBASIC1.36□□□□□ -2.19
CFAP54Q96N23 AC006329.2-201ENST00000611491 394 ntBASIC1.36□□□□□ -2.19
CFAP54Q96N23 AC011890.2-201ENST00000613393 294 ntBASIC1.36□□□□□ -2.19
CFAP54Q96N23 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.36□□□□□ -2.19
CFAP54Q96N23 MIR6715B-201ENST00000637172 77 ntBASIC1.36□□□□□ -2.19
CFAP54Q96N23 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
CFAP54Q96N23 AC018630.2-201ENST00000534866 2403 ntBASIC1.35□□□□□ -2.19
CFAP54Q96N23 AL139109.1-201ENST00000455491 297 ntBASIC1.35□□□□□ -2.19
CFAP54Q96N23 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.35□□□□□ -2.19
CFAP54Q96N23 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CFAP54Q96N23 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.35□□□□□ -2.19
CFAP54Q96N23 AC013553.2-201ENST00000604244 589 ntBASIC1.35□□□□□ -2.19
CFAP54Q96N23 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
CFAP54Q96N23 RNA5SP354-201ENST00000391247 136 ntBASIC1.35□□□□□ -2.19
CFAP54Q96N23 AC009965.2-201ENST00000425328 970 ntBASIC1.35□□□□□ -2.19
CFAP54Q96N23 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.35□□□□□ -2.19
CFAP54Q96N23 RPL23AP35-201ENST00000451906 501 ntBASIC1.35□□□□□ -2.19
CFAP54Q96N23 AC005912.1-201ENST00000495392 255 ntBASIC1.35□□□□□ -2.19
CFAP54Q96N23 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.35□□□□□ -2.19
CFAP54Q96N23 OR4K8P-201ENST00000578842 1048 ntBASIC1.35□□□□□ -2.19
CFAP54Q96N23 AL121917.1-203ENST00000605534 577 ntBASIC1.35□□□□□ -2.19
CFAP54Q96N23 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CFAP54Q96N23 Y_RNA.60-201ENST00000362831 98 ntBASIC1.34□□□□□ -2.19
CFAP54Q96N23 MIR320A-201ENST00000385302 82 ntBASIC1.34□□□□□ -2.19
CFAP54Q96N23 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CFAP54Q96N23 RPL35AP22-201ENST00000436855 335 ntBASIC1.34□□□□□ -2.19
CFAP54Q96N23 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CFAP54Q96N23 AC108059.3-201ENST00000456388 214 ntBASIC1.34□□□□□ -2.19
CFAP54Q96N23 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC1.34□□□□□ -2.19
CFAP54Q96N23 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.34□□□□□ -2.19
CFAP54Q96N23 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.34□□□□□ -2.19
CFAP54Q96N23 MIR3660-201ENST00000584845 100 ntBASIC1.34□□□□□ -2.19
CFAP54Q96N23 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.34□□□□□ -2.19
CFAP54Q96N23 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.34□□□□□ -2.2
CFAP54Q96N23 AL353718.1-201ENST00000451028 517 ntBASIC1.34□□□□□ -2.2
CFAP54Q96N23 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.34□□□□□ -2.2
CFAP54Q96N23 DNAJC8P1-201ENST00000554535 372 ntBASIC1.34□□□□□ -2.2
CFAP54Q96N23 AL049838.1-201ENST00000563647 981 ntBASIC1.34□□□□□ -2.2
CFAP54Q96N23 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.34□□□□□ -2.2
CFAP54Q96N23 AP000676.4-201ENST00000624659 623 ntBASIC1.34□□□□□ -2.2
CFAP54Q96N23 AP001486.2-201ENST00000561652 5113 ntBASIC1.34□□□□□ -2.2
CFAP54Q96N23 AL359851.1-201ENST00000569460 4997 ntBASIC1.34□□□□□ -2.2
CFAP54Q96N23 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
CFAP54Q96N23 USP9YP33-201ENST00000412220 421 ntBASIC1.34□□□□□ -2.2
CFAP54Q96N23 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.34□□□□□ -2.2
CFAP54Q96N23 RPL17P12-201ENST00000413391 526 ntBASIC1.34□□□□□ -2.2
CFAP54Q96N23 Z85995.1-201ENST00000415547 335 ntBASIC1.34□□□□□ -2.2
CFAP54Q96N23 WARS2P1-201ENST00000429678 537 ntBASIC1.34□□□□□ -2.2
CFAP54Q96N23 USP9YP35-201ENST00000435696 412 ntBASIC1.34□□□□□ -2.2
CFAP54Q96N23 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.34□□□□□ -2.2
CFAP54Q96N23 SEPT7P9-203ENST00000604116 343 ntBASIC1.34□□□□□ -2.2
CFAP54Q96N23 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.34□□□□□ -2.2
CFAP54Q96N23 AL020996.3-201ENST00000606617 222 ntBASIC1.34□□□□□ -2.2
CFAP54Q96N23 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.34□□□□□ -2.2
CFAP54Q96N23 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CFAP54Q96N23 XIAPP3-201ENST00000312918 795 ntBASIC1.33□□□□□ -2.2
CFAP54Q96N23 RNA5SP127-201ENST00000411051 133 ntBASIC1.33□□□□□ -2.2
CFAP54Q96N23 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.33□□□□□ -2.2
CFAP54Q96N23 NDUFS5P3-201ENST00000450668 321 ntBASIC1.33□□□□□ -2.2
CFAP54Q96N23 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.33□□□□□ -2.2
CFAP54Q96N23 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.33□□□□□ -2.2
CFAP54Q96N23 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.33□□□□□ -2.2
CFAP54Q96N23 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CFAP54Q96N23 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.33□□□□□ -2.2
CFAP54Q96N23 AL445687.1-201ENST00000439946 251 ntBASIC1.33□□□□□ -2.2
CFAP54Q96N23 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.33□□□□□ -2.2
CFAP54Q96N23 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.33□□□□□ -2.2
CFAP54Q96N23 AC139103.1-201ENST00000534696 1030 ntBASIC1.33□□□□□ -2.2
CFAP54Q96N23 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
CFAP54Q96N23 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CFAP54Q96N23 AC018630.2-202ENST00000422992 927 ntBASIC1.32□□□□□ -2.2
CFAP54Q96N23 AL031659.1-201ENST00000447075 539 ntBASIC1.32□□□□□ -2.2
CFAP54Q96N23 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.32□□□□□ -2.2
CFAP54Q96N23 MIR3618-201ENST00000580330 88 ntBASIC1.32□□□□□ -2.2
CFAP54Q96N23 AC135776.4-201ENST00000624300 1904 ntBASIC1.32□□□□□ -2.2
CFAP54Q96N23 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.32□□□□□ -2.2
CFAP54Q96N23 AC013470.3-201ENST00000420252 1194 ntBASIC1.32□□□□□ -2.2
CFAP54Q96N23 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.32□□□□□ -2.2
CFAP54Q96N23 AC010265.1-201ENST00000513509 211 ntBASIC1.32□□□□□ -2.2
CFAP54Q96N23 MAGOH2P-202ENST00000584384 429 ntBASIC1.32□□□□□ -2.2
CFAP54Q96N23 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
CFAP54Q96N23 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC1.32□□□□□ -2.2
CFAP54Q96N23 SNORA62.2-201ENST00000364672 152 ntBASIC1.31□□□□□ -2.2
CFAP54Q96N23 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.31□□□□□ -2.2
CFAP54Q96N23 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.31□□□□□ -2.2
CFAP54Q96N23 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.31□□□□□ -2.2
CFAP54Q96N23 MIR3935-201ENST00000583472 104 ntBASIC1.31□□□□□ -2.2
CFAP54Q96N23 AC016590.3-201ENST00000611171 753 ntBASIC1.31□□□□□ -2.2
CFAP54Q96N23 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
CFAP54Q96N23 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CFAP54Q96N23 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC1.31□□□□□ -2.2
CFAP54Q96N23 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.31□□□□□ -2.2
CFAP54Q96N23 HSPE1P11-201ENST00000339579 310 ntBASIC1.31□□□□□ -2.2
CFAP54Q96N23 AL030996.1-201ENST00000411430 235 ntBASIC1.31□□□□□ -2.2
CFAP54Q96N23 AC110792.2-201ENST00000510278 224 ntBASIC1.31□□□□□ -2.2
CFAP54Q96N23 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.31□□□□□ -2.2
CFAP54Q96N23 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms