Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 SNORA75.4-201ENST00000391278 119 ntBASIC4.9□□□□□ -1.63
DDX11Q96FC9 VN1R36P-201ENST00000414936 291 ntBASIC4.9□□□□□ -1.63
DDX11Q96FC9 AC009161.1-201ENST00000417306 376 ntBASIC4.9□□□□□ -1.63
DDX11Q96FC9 RPS15AP12-201ENST00000419498 388 ntBASIC4.9□□□□□ -1.63
DDX11Q96FC9 AL645937.1-202ENST00000421799 937 ntBASIC4.9□□□□□ -1.63
DDX11Q96FC9 ATP5JP1-201ENST00000431631 322 ntBASIC4.9□□□□□ -1.63
DDX11Q96FC9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.9□□□□□ -1.63
DDX11Q96FC9 AC236972.2-201ENST00000434979 310 ntBASIC4.9□□□□□ -1.63
DDX11Q96FC9 HMGB1P18-201ENST00000438801 619 ntBASIC4.9□□□□□ -1.63
DDX11Q96FC9 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.9□□□□□ -1.63
DDX11Q96FC9 AL162151.2-201ENST00000448875 158 ntBASIC4.9□□□□□ -1.63
DDX11Q96FC9 AL451050.1-201ENST00000450126 415 ntBASIC4.9□□□□□ -1.63
DDX11Q96FC9 AC104073.1-201ENST00000451988 151 ntBASIC4.9□□□□□ -1.63
DDX11Q96FC9 AL356010.1-201ENST00000456364 102 ntBASIC4.9□□□□□ -1.63
DDX11Q96FC9 AP1S2P1-201ENST00000457344 379 ntBASIC4.9□□□□□ -1.63
DDX11Q96FC9 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.9□□□□□ -1.63
DDX11Q96FC9 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.9□□□□□ -1.63
DDX11Q96FC9 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.9□□□□□ -1.63
DDX11Q96FC9 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.9□□□□□ -1.63
DDX11Q96FC9 AC025554.1-201ENST00000505641 188 ntBASIC4.9□□□□□ -1.63
DDX11Q96FC9 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.9□□□□□ -1.63
DDX11Q96FC9 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.9□□□□□ -1.63
DDX11Q96FC9 RNA5SP73-201ENST00000516744 108 ntBASIC4.9□□□□□ -1.63
DDX11Q96FC9 RNU6-1314P-201ENST00000517139 104 ntBASIC4.9□□□□□ -1.63
DDX11Q96FC9 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.9□□□□□ -1.63
DDX11Q96FC9 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.9□□□□□ -1.63
DDX11Q96FC9 OR4T1P-201ENST00000554933 911 ntBASIC4.9□□□□□ -1.63
DDX11Q96FC9 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.9□□□□□ -1.63
DDX11Q96FC9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.9□□□□□ -1.63
DDX11Q96FC9 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.9□□□□□ -1.63
DDX11Q96FC9 AC103858.2-201ENST00000621471 543 ntBASIC4.9□□□□□ -1.63
DDX11Q96FC9 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.9□□□□□ -1.63
DDX11Q96FC9 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.9□□□□□ -1.63
DDX11Q96FC9 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
DDX11Q96FC9 ZNF33CP-201ENST00000432492 2030 ntBASIC4.9□□□□□ -1.63
DDX11Q96FC9 AL122126.1-201ENST00000546905 1318 ntBASIC4.9□□□□□ -1.63
DDX11Q96FC9 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.9□□□□□ -1.63
DDX11Q96FC9 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
DDX11Q96FC9 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.9□□□□□ -1.63
DDX11Q96FC9 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
DDX11Q96FC9 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
DDX11Q96FC9 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
DDX11Q96FC9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
DDX11Q96FC9 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.89□□□□□ -1.63
DDX11Q96FC9 NACAP2-201ENST00000318548 624 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 RNA5SP513-201ENST00000364648 118 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 AL356421.1-201ENST00000403255 413 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 MIR548P-201ENST00000408336 84 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.89□□□□□ -1.63
DDX11Q96FC9 AC012065.2-201ENST00000421295 375 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 RPL7P2-201ENST00000427639 268 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 AL590233.1-201ENST00000430017 456 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 AC119618.1-201ENST00000434191 222 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.89□□□□□ -1.63
DDX11Q96FC9 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.89□□□□□ -1.63
DDX11Q96FC9 BRK1P2-201ENST00000442875 223 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.89□□□□□ -1.63
DDX11Q96FC9 RPS26P56-201ENST00000444468 240 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
DDX11Q96FC9 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.89□□□□□ -1.63
DDX11Q96FC9 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.89□□□□□ -1.63
DDX11Q96FC9 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.89□□□□□ -1.63
DDX11Q96FC9 RNU7-63P-201ENST00000459054 62 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 snoU13.7-201ENST00000459220 104 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 SNORA84-201ENST00000459229 133 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 RNU6-329P-201ENST00000459618 107 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 SNORD19B-201ENST00000459623 84 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 HMGN2P26-201ENST00000463169 339 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 MRPS17P3-201ENST00000465453 385 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 AC055855.1-201ENST00000489563 579 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.89□□□□□ -1.63
DDX11Q96FC9 AC020593.1-201ENST00000507399 299 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 TMEM248P1-201ENST00000510579 951 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 AC021146.1-201ENST00000511202 716 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.89□□□□□ -1.63
DDX11Q96FC9 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.89□□□□□ -1.63
DDX11Q96FC9 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.89□□□□□ -1.63
DDX11Q96FC9 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.89□□□□□ -1.63
DDX11Q96FC9 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.89□□□□□ -1.63
DDX11Q96FC9 AC005668.1-201ENST00000571142 476 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 MIR4286-201ENST00000580651 93 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
DDX11Q96FC9 MIR3171-201ENST00000584270 74 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.89□□□□□ -1.63
DDX11Q96FC9 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.89□□□□□ -1.63
DDX11Q96FC9 AC012603.1-201ENST00000606424 528 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 AL355802.3-201ENST00000607571 545 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 AL133215.3-201ENST00000609801 448 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 Z82217.1-201ENST00000625157 8149 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.89□□□□□ -1.63
DDX11Q96FC9 MAPK10-253ENST00000641010 4072 ntBASIC4.89□□□□□ -1.63
DDX11Q96FC9 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
DDX11Q96FC9 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
DDX11Q96FC9 AC011978.2-201ENST00000569835 2054 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
DDX11Q96FC9 AC130650.2-201ENST00000618736 2403 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.88□□□□□ -1.63
DDX11Q96FC9 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.88□□□□□ -1.63
DDX11Q96FC9 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.88□□□□□ -1.63
DDX11Q96FC9 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms