Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.41□□□□□ -2.18
TTC28Q96AY4 AC022447.3-201ENST00000506865 495 ntBASIC1.41□□□□□ -2.18
TTC28Q96AY4 AC010265.1-201ENST00000513509 211 ntBASIC1.41□□□□□ -2.18
TTC28Q96AY4 RNA5SP385-201ENST00000515947 110 ntBASIC1.41□□□□□ -2.18
TTC28Q96AY4 AC068446.3-201ENST00000555285 382 ntBASIC1.41□□□□□ -2.18
TTC28Q96AY4 MTND2P13-201ENST00000577438 1039 ntBASIC1.41□□□□□ -2.18
TTC28Q96AY4 ELOCP34-201ENST00000604436 327 ntBASIC1.41□□□□□ -2.18
TTC28Q96AY4 KATNBL1P1-201ENST00000605192 748 ntBASIC1.41□□□□□ -2.18
TTC28Q96AY4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.41□□□□□ -2.18
TTC28Q96AY4 AC116447.1-201ENST00000613153 453 ntBASIC1.41□□□□□ -2.18
TTC28Q96AY4 AC009318.3-201ENST00000616916 503 ntBASIC1.41□□□□□ -2.18
TTC28Q96AY4 XIAPP3-201ENST00000312918 795 ntBASIC1.41□□□□□ -2.18
TTC28Q96AY4 HSPE1P11-201ENST00000339579 310 ntBASIC1.41□□□□□ -2.18
TTC28Q96AY4 MIR758-201ENST00000390227 88 ntBASIC1.41□□□□□ -2.18
TTC28Q96AY4 AL030996.1-201ENST00000411430 235 ntBASIC1.41□□□□□ -2.18
TTC28Q96AY4 AC009302.1-201ENST00000417147 390 ntBASIC1.41□□□□□ -2.18
TTC28Q96AY4 RPL7P53-201ENST00000421245 739 ntBASIC1.41□□□□□ -2.18
TTC28Q96AY4 AC018630.2-202ENST00000422992 927 ntBASIC1.41□□□□□ -2.18
TTC28Q96AY4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.41□□□□□ -2.18
TTC28Q96AY4 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.41□□□□□ -2.18
TTC28Q96AY4 NEFMP1-201ENST00000443423 1006 ntBASIC1.41□□□□□ -2.18
TTC28Q96AY4 RPL34P26-201ENST00000445636 354 ntBASIC1.41□□□□□ -2.18
TTC28Q96AY4 HMGB3P21-201ENST00000452483 547 ntBASIC1.41□□□□□ -2.18
TTC28Q96AY4 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
TTC28Q96AY4 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
TTC28Q96AY4 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC1.41□□□□□ -2.18
TTC28Q96AY4 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC1.41□□□□□ -2.18
TTC28Q96AY4 RNU6-225P-201ENST00000384613 103 ntBASIC1.4□□□□□ -2.19
TTC28Q96AY4 DHFRP5-201ENST00000406944 564 ntBASIC1.4□□□□□ -2.19
TTC28Q96AY4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.4□□□□□ -2.19
TTC28Q96AY4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.4□□□□□ -2.19
TTC28Q96AY4 OR8X1P-201ENST00000534542 869 ntBASIC1.4□□□□□ -2.19
TTC28Q96AY4 AL389895.1-201ENST00000554127 252 ntBASIC1.4□□□□□ -2.19
TTC28Q96AY4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC1.4□□□□□ -2.19
TTC28Q96AY4 AC097504.2-201ENST00000608088 454 ntBASIC1.4□□□□□ -2.19
TTC28Q96AY4 AC114546.3-201ENST00000623582 1734 ntBASIC1.4□□□□□ -2.19
TTC28Q96AY4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.4□□□□□ -2.19
TTC28Q96AY4 MTCO1P6-201ENST00000481192 1384 ntBASIC1.4□□□□□ -2.19
TTC28Q96AY4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
TTC28Q96AY4 RNU4-7P-201ENST00000364758 141 ntBASIC1.4□□□□□ -2.19
TTC28Q96AY4 RNA5SP344-201ENST00000411081 104 ntBASIC1.4□□□□□ -2.19
TTC28Q96AY4 CYCSP48-201ENST00000417124 323 ntBASIC1.4□□□□□ -2.19
TTC28Q96AY4 Z85994.2-201ENST00000434327 452 ntBASIC1.4□□□□□ -2.19
TTC28Q96AY4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.4□□□□□ -2.19
TTC28Q96AY4 RPL23AP44-201ENST00000482216 473 ntBASIC1.4□□□□□ -2.19
TTC28Q96AY4 ARL2BPP4-201ENST00000506854 471 ntBASIC1.4□□□□□ -2.19
TTC28Q96AY4 NDUFB4P9-201ENST00000511646 388 ntBASIC1.4□□□□□ -2.19
TTC28Q96AY4 HSPE1P4-201ENST00000550617 308 ntBASIC1.4□□□□□ -2.19
TTC28Q96AY4 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.4□□□□□ -2.19
TTC28Q96AY4 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TTC28Q96AY4 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC1.4□□□□□ -2.19
TTC28Q96AY4 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
TTC28Q96AY4 AC135776.4-201ENST00000624300 1904 ntBASIC1.39□□□□□ -2.19
TTC28Q96AY4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
TTC28Q96AY4 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TTC28Q96AY4 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
TTC28Q96AY4 RNU6-105P-201ENST00000363909 104 ntBASIC1.39□□□□□ -2.19
TTC28Q96AY4 RNA5SP138-201ENST00000365098 114 ntBASIC1.39□□□□□ -2.19
TTC28Q96AY4 RNA5SP105-201ENST00000391123 113 ntBASIC1.39□□□□□ -2.19
TTC28Q96AY4 AL033519.2-201ENST00000403958 392 ntBASIC1.39□□□□□ -2.19
TTC28Q96AY4 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC1.39□□□□□ -2.19
TTC28Q96AY4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.39□□□□□ -2.19
TTC28Q96AY4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.39□□□□□ -2.19
TTC28Q96AY4 AC104435.1-201ENST00000483483 166 ntBASIC1.39□□□□□ -2.19
TTC28Q96AY4 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.39□□□□□ -2.19
TTC28Q96AY4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.39□□□□□ -2.19
TTC28Q96AY4 MTND5P21-201ENST00000531961 522 ntBASIC1.39□□□□□ -2.19
TTC28Q96AY4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.39□□□□□ -2.19
TTC28Q96AY4 MIR3660-201ENST00000584845 100 ntBASIC1.39□□□□□ -2.19
TTC28Q96AY4 AC092447.7-201ENST00000422212 1621 ntBASIC1.39□□□□□ -2.19
TTC28Q96AY4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TTC28Q96AY4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
TTC28Q96AY4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.39□□□□□ -2.19
TTC28Q96AY4 Y_RNA.167-201ENST00000363735 109 ntBASIC1.39□□□□□ -2.19
TTC28Q96AY4 RPL26P37-201ENST00000411983 438 ntBASIC1.39□□□□□ -2.19
TTC28Q96AY4 MTND4LP21-201ENST00000415303 295 ntBASIC1.39□□□□□ -2.19
TTC28Q96AY4 AC010627.1-201ENST00000503819 1294 ntBASIC1.39□□□□□ -2.19
TTC28Q96AY4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.39□□□□□ -2.19
TTC28Q96AY4 RN7SKP265-201ENST00000516448 223 ntBASIC1.39□□□□□ -2.19
TTC28Q96AY4 IMMP1LP2-201ENST00000552954 492 ntBASIC1.39□□□□□ -2.19
TTC28Q96AY4 MIR4723-201ENST00000585070 81 ntBASIC1.39□□□□□ -2.19
TTC28Q96AY4 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.39□□□□□ -2.19
TTC28Q96AY4 SGO1P2-201ENST00000429458 1589 ntBASIC1.38□□□□□ -2.19
TTC28Q96AY4 SNORA18.2-201ENST00000383865 132 ntBASIC1.38□□□□□ -2.19
TTC28Q96AY4 SNORA40.6-201ENST00000391153 128 ntBASIC1.38□□□□□ -2.19
TTC28Q96AY4 USP9YP7-201ENST00000436723 430 ntBASIC1.38□□□□□ -2.19
TTC28Q96AY4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.38□□□□□ -2.19
TTC28Q96AY4 USP9YP32-201ENST00000452432 430 ntBASIC1.38□□□□□ -2.19
TTC28Q96AY4 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
TTC28Q96AY4 HMGN1P8-201ENST00000463578 288 ntBASIC1.38□□□□□ -2.19
TTC28Q96AY4 TBCAP3-201ENST00000512475 312 ntBASIC1.38□□□□□ -2.19
TTC28Q96AY4 RNU6-347P-201ENST00000516658 105 ntBASIC1.38□□□□□ -2.19
TTC28Q96AY4 AC004486.1-201ENST00000546846 233 ntBASIC1.38□□□□□ -2.19
TTC28Q96AY4 MTND4LP5-201ENST00000605152 292 ntBASIC1.38□□□□□ -2.19
TTC28Q96AY4 AL627309.6-201ENST00000606857 840 ntBASIC1.38□□□□□ -2.19
TTC28Q96AY4 AC099778.2-201ENST00000610904 211 ntBASIC1.38□□□□□ -2.19
TTC28Q96AY4 AC012531.5-201ENST00000611375 151 ntBASIC1.38□□□□□ -2.19
TTC28Q96AY4 AC121761.2-201ENST00000617300 689 ntBASIC1.38□□□□□ -2.19
TTC28Q96AY4 AL158801.5-201ENST00000623123 465 ntBASIC1.38□□□□□ -2.19
TTC28Q96AY4 AP000676.4-201ENST00000624659 623 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms