Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 SNORD27.1-201ENST00000516319 72 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 RNU2-10P-201ENST00000516375 211 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 MIR2114-201ENST00000516645 80 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 MRPL49P2-201ENST00000521066 465 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 MIR6867-201ENST00000610636 67 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 TUG1_1.1-201ENST00000610654 145 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 RMST_3.1-201ENST00000611651 109 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 AC079684.1-201ENST00000621405 437 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 AC024614.3-201ENST00000637860 256 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 RLIMP1-201ENST00000339626 1680 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 RNU6-754P-201ENST00000391166 107 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 HSPD1P16-201ENST00000402302 394 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 MED13P1-201ENST00000428342 171 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 AC016712.1-201ENST00000431088 378 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 AL138799.3-201ENST00000438968 350 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 AC006480.1-201ENST00000449887 378 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 AC007967.1-201ENST00000455422 1159 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 AC233702.1-201ENST00000482905 502 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 RPS3AP50-201ENST00000487064 803 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 AC091951.2-201ENST00000500762 203 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 AC083829.1-201ENST00000503756 657 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 PCBP2P3-201ENST00000509726 843 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 SNORA31.9-201ENST00000516429 84 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 RNU7-51P-201ENST00000516560 62 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 RNU6-64P-201ENST00000517119 105 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 AC103783.1-201ENST00000520506 373 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 OR4R3P-201ENST00000525084 838 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 CENPUP1-201ENST00000526649 1202 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 OR5BN1P-201ENST00000532955 829 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 UBE2V2P2-201ENST00000587677 504 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 DISC2.1-201ENST00000612827 205 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 AC093838.1-201ENST00000613014 469 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 AL603758.1-201ENST00000618654 241 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 AC006504.8-201ENST00000621046 635 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 AL136313.1-201ENST00000624804 202 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 AC244517.1-201ENST00000606030 2086 ntBASIC3.98□□□□□ -1.77
ATG4AQ8WYN0 AL354685.2-201ENST00000448218 1447 ntBASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 AC126755.2-208ENST00000327792 462 ntBASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 AC138969.1-213ENST00000331436 462 ntBASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 Y_RNA.279-201ENST00000364763 95 ntBASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 RNU4-48P-201ENST00000365559 182 ntBASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 MIR199A2-201ENST00000385289 110 ntBASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 RNU6-837P-201ENST00000391056 108 ntBASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 AL109755.1-201ENST00000401791 649 ntBASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 AL591416.1-201ENST00000404015 867 ntBASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 AL354719.1-201ENST00000406535 843 ntBASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 MTCO3P12-201ENST00000416718 547 ntBASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 AL356095.1-201ENST00000417217 199 ntBASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 AL137014.1-201ENST00000420490 1226 ntBASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 BEND7P1-201ENST00000422058 457 ntBASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 RPL21P109-201ENST00000422213 475 ntBASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 MTND3P23-201ENST00000431980 347 ntBASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 AC005094.1-201ENST00000440420 368 ntBASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 PPIAP3-201ENST00000450588 505 ntBASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 CACYBPP2-201ENST00000453625 678 ntBASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 AC234775.1-201ENST00000454247 670 ntBASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.97□□□□□ -1.77
ATG4AQ8WYN0 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms