Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PSMA2P3-201ENST00000429685 675 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 RBMX2P4-201ENST00000441256 376 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 RPL23AP33-201ENST00000442301 452 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 AL513328.1-201ENST00000446460 224 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 MTCO2P25-201ENST00000447065 681 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 AL359385.1-201ENST00000456509 365 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 HSPE1P6-201ENST00000479457 291 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 AC109486.1-201ENST00000486833 374 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 AC116353.2-201ENST00000505332 712 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 SCGB1D5P-201ENST00000515134 247 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 FABP5P5-201ENST00000515537 406 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 AC124293.1-201ENST00000530034 493 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 CBX3P5-201ENST00000552017 521 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 SERPINE4P-201ENST00000554978 281 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 AC006270.2-201ENST00000578523 652 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 MIR548S-201ENST00000581352 82 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 MIR4435-1-201ENST00000582552 80 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 AC013476.2-201ENST00000614456 459 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 AC138649.5-201ENST00000637456 137 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SNED1Q8TER0 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SNED1Q8TER0 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SNED1Q8TER0 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.51□□□□□ -1.85
SNED1Q8TER0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
SNED1Q8TER0 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
SNED1Q8TER0 RNU6-543P-201ENST00000362576 108 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SNED1Q8TER0 RNY3P10-201ENST00000384764 102 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 RNU2-66P-201ENST00000410650 161 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 RNA5SP21-201ENST00000410917 96 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 RNA5SP107-201ENST00000411358 122 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.51□□□□□ -1.85
SNED1Q8TER0 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 CYCSP46-201ENST00000423569 204 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.51□□□□□ -1.85
SNED1Q8TER0 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.51□□□□□ -1.85
SNED1Q8TER0 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.51□□□□□ -1.85
SNED1Q8TER0 USP9YP22-201ENST00000438971 294 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.51□□□□□ -1.85
SNED1Q8TER0 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.51□□□□□ -1.85
SNED1Q8TER0 AP001025.2-201ENST00000490908 477 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.51□□□□□ -1.85
SNED1Q8TER0 RPL37P25-201ENST00000507308 276 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.51□□□□□ -1.85
SNED1Q8TER0 MTCO1P30-201ENST00000515244 580 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 RN7SKP277-201ENST00000516895 283 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.51□□□□□ -1.85
SNED1Q8TER0 AP001207.1-201ENST00000524051 481 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.51□□□□□ -1.85
SNED1Q8TER0 AP004242.1-201ENST00000533701 349 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 AC005832.3-201ENST00000537929 631 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.51□□□□□ -1.85
SNED1Q8TER0 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.51□□□□□ -1.85
SNED1Q8TER0 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.51□□□□□ -1.85
SNED1Q8TER0 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.51□□□□□ -1.85
SNED1Q8TER0 NDUFA8P1-201ENST00000605525 367 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 LARP7P1-201ENST00000605576 316 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 AC068276.1-201ENST00000605793 379 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 AC092354.1-201ENST00000606057 376 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 AP005137.2-201ENST00000609238 400 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 AC017083.3-201ENST00000609955 700 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 AC025594.3-201ENST00000613068 790 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.51□□□□□ -1.85
SNED1Q8TER0 U6.107-201ENST00000637108 79 ntBASIC3.51□□□□□ -1.85
SNED1Q8TER0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.51□□□□□ -1.85
SNED1Q8TER0 SNORA75-201ENST00000384158 137 ntBASIC3.5□□□□□ -1.85
SNED1Q8TER0 RPS3AP24-201ENST00000407896 734 ntBASIC3.5□□□□□ -1.85
SNED1Q8TER0 MIR548F1-201ENST00000408667 84 ntBASIC3.5□□□□□ -1.85
SNED1Q8TER0 RNU2-21P-201ENST00000410368 188 ntBASIC3.5□□□□□ -1.85
SNED1Q8TER0 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.5□□□□□ -1.85
SNED1Q8TER0 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.5□□□□□ -1.85
SNED1Q8TER0 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SNED1Q8TER0 HMGB1P45-201ENST00000435986 653 ntBASIC3.5□□□□□ -1.85
SNED1Q8TER0 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.5□□□□□ -1.85
SNED1Q8TER0 AC126182.1-201ENST00000478134 357 ntBASIC3.5□□□□□ -1.85
SNED1Q8TER0 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.5□□□□□ -1.85
SNED1Q8TER0 AC096751.1-202ENST00000502691 1067 ntBASIC3.5□□□□□ -1.85
SNED1Q8TER0 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.5□□□□□ -1.85
SNED1Q8TER0 AC117522.3-201ENST00000507974 584 ntBASIC3.5□□□□□ -1.85
SNED1Q8TER0 SNORA64.4-201ENST00000516632 81 ntBASIC3.5□□□□□ -1.85
SNED1Q8TER0 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.5□□□□□ -1.85
SNED1Q8TER0 AC083923.1-201ENST00000523708 376 ntBASIC3.5□□□□□ -1.85
SNED1Q8TER0 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.5□□□□□ -1.85
SNED1Q8TER0 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms