Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 RN7SKP13-201ENST00000515933 244 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 RNU6-1088P-201ENST00000516850 104 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 RNA5SP165-201ENST00000517142 115 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 RNA5SP454-201ENST00000517231 127 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 IGLV3-26-201ENST00000520756 302 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AC107016.1-201ENST00000550463 337 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 RPA2P1-201ENST00000556557 721 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AC008521.2-201ENST00000591021 259 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AC002044.1-201ENST00000606707 158 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AP001437.1-201ENST00000608783 456 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 RMST_4.1-201ENST00000616886 107 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AC099506.2-201ENST00000623074 221 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AC090574.1-201ENST00000623186 233 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AC008013.2-202ENST00000637965 364 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 RNA5SP110-201ENST00000362638 115 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 Y_RNA.431-201ENST00000384086 102 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 MIR325-201ENST00000385260 98 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AL360182.1-201ENST00000397433 468 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 MIR548K-201ENST00000408406 116 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 RPS20P14-201ENST00000412545 360 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 ATP5A1P8-201ENST00000423669 1291 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AL049745.1-201ENST00000433953 286 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AC092573.2-201ENST00000434546 243 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AC236972.2-201ENST00000434979 310 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AC233279.1-201ENST00000455300 423 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 RNU7-138P-201ENST00000459479 64 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AC068228.1-201ENST00000461723 211 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 RN7SL168P-201ENST00000463821 279 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AC023194.2-201ENST00000465398 406 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AC068587.1-201ENST00000483613 781 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AL117692.1-201ENST00000494283 713 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 MIR892C-201ENST00000516410 77 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 RN7SKP183-201ENST00000517169 324 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 SNORA25.17-201ENST00000517184 124 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 MED21-206ENST00000546323 575 ntTSL 3 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AL110118.1-201ENST00000553543 400 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 TRAV37-201ENST00000553906 342 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 NDUFB4P11-201ENST00000560510 395 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AC007151.1-201ENST00000572774 483 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 MIR4790-201ENST00000577799 79 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AC138761.3-201ENST00000579993 334 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 MIR4271-201ENST00000582451 67 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AC004805.2-201ENST00000605382 482 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AL136131.3-201ENST00000607600 188 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AC092266.1-201ENST00000610958 165 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 MIR6889-201ENST00000613185 59 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AC005344.1-201ENST00000613391 459 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 FAM157A-202ENST00000615155 405 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AC111152.1-202ENST00000635848 339 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 CUL1P1-201ENST00000509510 2425 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 AC104966.1-201ENST00000467010 1464 ntBASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms