Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP38Q8NB14 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USP38Q8NB14 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
USP38Q8NB14 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
USP38Q8NB14 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
USP38Q8NB14 Y_RNA.46-201ENST00000362695 102 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USP38Q8NB14 RNU6-882P-201ENST00000391025 103 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 RNU6-516P-201ENST00000411381 104 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 HMGB3P20-201ENST00000417997 600 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 ARF4P2-201ENST00000430209 526 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 NDUFB1P1-201ENST00000435191 180 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.94□□□□□ -1.78
USP38Q8NB14 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.94□□□□□ -1.78
USP38Q8NB14 TAF9P1-201ENST00000445421 515 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 TAF9P2-201ENST00000454958 515 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 RNU6-956P-201ENST00000458868 103 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 RN7SL330P-201ENST00000469709 307 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 AC004924.1-201ENST00000480160 781 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 RPS3AP50-201ENST00000487064 803 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 AC112204.1-201ENST00000502591 103 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.94□□□□□ -1.78
USP38Q8NB14 SNORA70.18-201ENST00000516696 98 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.94□□□□□ -1.78
USP38Q8NB14 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.94□□□□□ -1.78
USP38Q8NB14 SNRPGP16-201ENST00000533275 226 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
USP38Q8NB14 AC008011.1-201ENST00000545989 227 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.94□□□□□ -1.78
USP38Q8NB14 AC125611.2-201ENST00000551907 647 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.94□□□□□ -1.78
USP38Q8NB14 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.94□□□□□ -1.78
USP38Q8NB14 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.94□□□□□ -1.78
USP38Q8NB14 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.94□□□□□ -1.78
USP38Q8NB14 AC034105.3-201ENST00000565294 442 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.94□□□□□ -1.78
USP38Q8NB14 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.94□□□□□ -1.78
USP38Q8NB14 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.94□□□□□ -1.78
USP38Q8NB14 BDH2P1-201ENST00000602288 736 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 AC068790.3-201ENST00000602988 553 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 RPL12P50-201ENST00000603116 116 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 RNVU1-4-201ENST00000612985 164 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 AC007998.5-201ENST00000622938 237 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 AC009902.3-201ENST00000606235 2172 ntBASIC3.94□□□□□ -1.78
USP38Q8NB14 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.94□□□□□ -1.78
USP38Q8NB14 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.94□□□□□ -1.78
USP38Q8NB14 MTND5P33-201ENST00000571250 1450 ntBASIC3.93□□□□□ -1.78
USP38Q8NB14 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP38Q8NB14 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USP38Q8NB14 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
USP38Q8NB14 RNU4-35P-201ENST00000362588 141 ntBASIC3.93□□□□□ -1.78
USP38Q8NB14 RNU6-173P-201ENST00000364215 104 ntBASIC3.93□□□□□ -1.78
USP38Q8NB14 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
USP38Q8NB14 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.93□□□□□ -1.78
USP38Q8NB14 AC233728.2-201ENST00000425348 757 ntBASIC3.93□□□□□ -1.78
USP38Q8NB14 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.93□□□□□ -1.78
USP38Q8NB14 VDAC1P3-201ENST00000434069 851 ntBASIC3.93□□□□□ -1.78
USP38Q8NB14 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.93□□□□□ -1.78
USP38Q8NB14 MTND4LP3-201ENST00000468320 276 ntBASIC3.93□□□□□ -1.78
USP38Q8NB14 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.93□□□□□ -1.78
USP38Q8NB14 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.93□□□□□ -1.78
USP38Q8NB14 AC010424.1-201ENST00000506336 297 ntBASIC3.93□□□□□ -1.78
USP38Q8NB14 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.93□□□□□ -1.78
USP38Q8NB14 PCBP2P3-201ENST00000509726 843 ntBASIC3.93□□□□□ -1.78
USP38Q8NB14 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.93□□□□□ -1.78
USP38Q8NB14 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.93□□□□□ -1.78
USP38Q8NB14 AC007115.1-201ENST00000546853 234 ntBASIC3.93□□□□□ -1.78
USP38Q8NB14 ZNF519P3-201ENST00000557158 1032 ntBASIC3.93□□□□□ -1.78
USP38Q8NB14 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.93□□□□□ -1.78
USP38Q8NB14 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.93□□□□□ -1.78
USP38Q8NB14 AL590240.3-201ENST00000621416 943 ntBASIC3.93□□□□□ -1.78
USP38Q8NB14 AL353748.2-201ENST00000622148 471 ntBASIC3.93□□□□□ -1.78
USP38Q8NB14 AC010149.2-201ENST00000637608 315 ntBASIC3.93□□□□□ -1.78
USP38Q8NB14 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.93□□□□□ -1.78
USP38Q8NB14 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP38Q8NB14 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP38Q8NB14 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP38Q8NB14 FTLP6-201ENST00000355274 422 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 Y_RNA.51-201ENST00000362725 102 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.92□□□□□ -1.78
USP38Q8NB14 RNU6-637P-201ENST00000384050 107 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 U3.19-201ENST00000390893 196 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 SNORA48.8-201ENST00000391324 134 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 FCF1P10-201ENST00000407590 479 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 RN7SKP111-201ENST00000410349 271 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 Y_RNA.598-201ENST00000410480 95 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 AC078974.1-201ENST00000411597 223 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 BTF3L4P1-201ENST00000413813 468 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.92□□□□□ -1.78
USP38Q8NB14 MTND1P28-201ENST00000435623 950 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 SETP5-201ENST00000437270 562 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP38Q8NB14 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 TPT1P14-201ENST00000448018 505 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 RPL23AP31-201ENST00000456160 467 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 RPL31P13-201ENST00000484151 370 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.92□□□□□ -1.78
USP38Q8NB14 AC097462.2-201ENST00000504623 481 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 VN1R104P-201ENST00000505115 1009 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 FABP5P5-201ENST00000515537 406 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms