Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 AC147055.4-201ENST00000504399 745 ntBASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 AC109464.2-201ENST00000510242 943 ntBASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 SNORA31.11-201ENST00000516528 139 ntBASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 OR4K8P-201ENST00000578842 1048 ntBASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 DUXAP11-201ENST00000603858 526 ntBASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 AC103810.6-201ENST00000606708 136 ntBASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 AC010872.1-201ENST00000624225 675 ntBASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 AC012321.1-201ENST00000561622 1588 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 MIR449A-201ENST00000362113 91 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 RNA5SP289-201ENST00000362332 137 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 RNU5B-1-201ENST00000363286 116 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 XGY1-201ENST00000381172 446 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 RNU6-207P-201ENST00000384137 107 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 MIR627-201ENST00000384979 97 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 RNU6-193P-201ENST00000410977 107 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 RNU2-25P-201ENST00000411041 191 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 CCDC58P2-201ENST00000417131 366 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 AC027644.1-201ENST00000419595 298 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 NANOGP5-201ENST00000424456 877 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 RPL7P37-201ENST00000425095 738 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 UBE2D3P3-201ENST00000426992 425 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 MTND2P5-201ENST00000432656 1006 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 AC236972.1-201ENST00000433225 199 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 AC009237.8-201ENST00000445492 379 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 AC234775.1-201ENST00000454247 670 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 UBE2DNL-203ENST00000474922 222 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 RN7SL636P-201ENST00000497504 294 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 AC234781.5-201ENST00000508429 271 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 COL6A4P2-205ENST00000509855 506 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 RNU6-334P-201ENST00000517072 102 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 AP003122.3-201ENST00000526316 255 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 AP001646.1-201ENST00000527936 915 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 MIR4446-201ENST00000578505 67 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 DNAJC19P3-201ENST00000594491 331 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 AL136363.1-201ENST00000605349 337 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 AC004009.2-201ENST00000623016 728 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 AC073308.1-201ENST00000623696 305 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 AC103798.2-201ENST00000624292 632 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 AC079597.1-201ENST00000624306 508 ntBASIC2.11□□□□□ -2.07
ZIC4Q8N9L1 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 AC005832.2-201ENST00000538921 1430 ntBASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 RNU4-82P-201ENST00000362443 140 ntBASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 RNU5A-1-201ENST00000362698 116 ntBASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 RNA5SP393-201ENST00000363423 117 ntBASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 RPL22P22-201ENST00000395439 379 ntBASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 RN7SKP140-201ENST00000411196 284 ntBASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 AC096533.1-201ENST00000411645 353 ntBASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 DPRXP1-201ENST00000426312 460 ntBASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 RPL26P6-201ENST00000440913 438 ntBASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 MTCYBP11-201ENST00000447254 1109 ntBASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 OFD1P3Y-201ENST00000453312 783 ntBASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 AC023424.2-201ENST00000493479 777 ntBASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 RPS27P26-201ENST00000494583 239 ntBASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 OR5BM1P-201ENST00000512021 366 ntBASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 AC021269.2-201ENST00000532318 330 ntBASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 AMZ2P1-203ENST00000565833 850 ntBASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 AC080013.4-201ENST00000607624 649 ntBASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 AL592148.2-201ENST00000612210 372 ntBASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 AC011890.2-201ENST00000613393 294 ntBASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 AC087821.2-201ENST00000637086 450 ntBASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 OR5H6-203ENST00000642105 978 ntBASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ZIC4Q8N9L1 AC097714.1-201ENST00000511272 1647 ntBASIC2.09□□□□□ -2.07
ZIC4Q8N9L1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
ZIC4Q8N9L1 Z99496.1-201ENST00000469424 1477 ntBASIC2.09□□□□□ -2.07
ZIC4Q8N9L1 Y_RNA.25-201ENST00000362528 102 ntBASIC2.09□□□□□ -2.07
ZIC4Q8N9L1 SNRPEP2-201ENST00000397592 279 ntBASIC2.09□□□□□ -2.07
ZIC4Q8N9L1 RPS3AP24-201ENST00000407896 734 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms