Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.08□□□□□ -1.92
HDDC3Q8N4P3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.08□□□□□ -1.92
HDDC3Q8N4P3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
HDDC3Q8N4P3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HDDC3Q8N4P3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 RNU1-105P-201ENST00000363470 161 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 RNU6-621P-201ENST00000364752 109 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 Z85995.1-201ENST00000415547 335 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 PAXBP1P1-201ENST00000449315 447 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 MTND1P9-201ENST00000453775 944 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 FCF1P6-201ENST00000456841 595 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 AL135752.1-201ENST00000479477 471 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 AC009901.1-201ENST00000506703 541 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 SNORA64.4-201ENST00000516632 81 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 RNU6-56P-201ENST00000516986 93 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 AC087373.1-201ENST00000524920 491 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 TRAV37-201ENST00000553906 342 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 NBEAP1-201ENST00000554452 979 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 AL132857.1-201ENST00000555180 708 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 AL355836.1-201ENST00000555951 870 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 AC090888.1-201ENST00000561335 1141 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 MIR3945-201ENST00000581853 98 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 AC020895.1-201ENST00000595362 272 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 AC008739.2-201ENST00000597006 317 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 IGHVIII-44-202ENST00000636235 289 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 AC099786.3-201ENST00000565735 1410 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 AC004972.1-201ENST00000623934 2209 ntBASIC3.07□□□□□ -1.92
HDDC3Q8N4P3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 RNU6-270P-201ENST00000364131 105 ntBASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 USP9YP33-201ENST00000412220 421 ntBASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 AL390023.1-201ENST00000428836 262 ntBASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 MTND5P27-201ENST00000428871 1720 ntBASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 SETP8-201ENST00000435341 628 ntBASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 USP9YP35-201ENST00000435696 412 ntBASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 RPL23AP22-201ENST00000437556 453 ntBASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 AC112653.1-201ENST00000443851 386 ntBASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 RPL21P134-201ENST00000453468 483 ntBASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 AC114967.1-201ENST00000504890 259 ntBASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 AC116353.3-201ENST00000511215 249 ntBASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 AC023813.2-201ENST00000564321 469 ntBASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 AC068135.2-201ENST00000569293 1028 ntBASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 AC010680.1-201ENST00000590024 3590 ntBASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 AC107075.1-201ENST00000613695 314 ntBASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 AC009268.2-201ENST00000621925 457 ntBASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 AC002064.3-201ENST00000623448 346 ntBASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
HDDC3Q8N4P3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 DDX10P1-201ENST00000448545 1933 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 DDX43P2-201ENST00000604753 1354 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 AC011477.1-204ENST00000623416 1325 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 Y_RNA.192-201ENST00000363977 102 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 RNU6-289P-201ENST00000364093 107 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 U3.11-201ENST00000364476 212 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 RNU6-741P-201ENST00000383889 107 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 RNU6-114P-201ENST00000384704 105 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 MIR767-201ENST00000390228 109 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 RNU4-22P-201ENST00000411058 166 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 RNU6-516P-201ENST00000411381 104 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms