Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SIX5Q8N196 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SIX5Q8N196 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SIX5Q8N196 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.47□□□□□ -1.53
SIX5Q8N196 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SIX5Q8N196 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.47□□□□□ -1.53
SIX5Q8N196 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.47□□□□□ -1.53
SIX5Q8N196 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SIX5Q8N196 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SIX5Q8N196 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SIX5Q8N196 RNU6-1074P-201ENST00000383995 104 ntBASIC5.47□□□□□ -1.53
SIX5Q8N196 Y_RNA.447-201ENST00000384184 113 ntBASIC5.47□□□□□ -1.53
SIX5Q8N196 MIR625-201ENST00000385047 85 ntBASIC5.47□□□□□ -1.53
SIX5Q8N196 HSPA8P15-201ENST00000401676 786 ntBASIC5.47□□□□□ -1.53
SIX5Q8N196 AL078599.1-201ENST00000402075 293 ntBASIC5.47□□□□□ -1.53
SIX5Q8N196 AL138885.1-201ENST00000405921 675 ntBASIC5.47□□□□□ -1.53
SIX5Q8N196 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.47□□□□□ -1.53
SIX5Q8N196 MIR1302-6-201ENST00000408466 90 ntBASIC5.47□□□□□ -1.53
SIX5Q8N196 MTATP6P4-201ENST00000427725 675 ntBASIC5.47□□□□□ -1.53
SIX5Q8N196 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.47□□□□□ -1.53
SIX5Q8N196 AL592045.1-201ENST00000429867 352 ntBASIC5.47□□□□□ -1.53
SIX5Q8N196 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.47□□□□□ -1.53
SIX5Q8N196 RPS3AP12-201ENST00000443616 753 ntBASIC5.47□□□□□ -1.53
SIX5Q8N196 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.47□□□□□ -1.53
SIX5Q8N196 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.47□□□□□ -1.53
SIX5Q8N196 TRBV5-2-201ENST00000489095 273 ntBASIC5.47□□□□□ -1.53
SIX5Q8N196 RNU6-927P-201ENST00000516199 100 ntBASIC5.47□□□□□ -1.53
SIX5Q8N196 AC008033.2-201ENST00000542626 177 ntBASIC5.47□□□□□ -1.53
SIX5Q8N196 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.47□□□□□ -1.53
SIX5Q8N196 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.47□□□□□ -1.53
SIX5Q8N196 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.47□□□□□ -1.53
SIX5Q8N196 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SIX5Q8N196 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.47□□□□□ -1.53
SIX5Q8N196 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SIX5Q8N196 MIR5188-201ENST00000583467 113 ntBASIC5.47□□□□□ -1.53
SIX5Q8N196 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.47□□□□□ -1.53
SIX5Q8N196 MTND4LP5-201ENST00000605152 292 ntBASIC5.47□□□□□ -1.53
SIX5Q8N196 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.47□□□□□ -1.53
SIX5Q8N196 AC015967.1-201ENST00000619893 476 ntBASIC5.47□□□□□ -1.53
SIX5Q8N196 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.47□□□□□ -1.53
SIX5Q8N196 U6.104-201ENST00000637979 90 ntBASIC5.47□□□□□ -1.53
SIX5Q8N196 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.47□□□□□ -1.53
SIX5Q8N196 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.47□□□□□ -1.53
SIX5Q8N196 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SIX5Q8N196 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SIX5Q8N196 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SIX5Q8N196 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
SIX5Q8N196 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.47□□□□□ -1.53
SIX5Q8N196 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SIX5Q8N196 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SIX5Q8N196 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.46□□□□□ -1.53
SIX5Q8N196 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
SIX5Q8N196 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
SIX5Q8N196 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.46□□□□□ -1.54
SIX5Q8N196 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.46□□□□□ -1.54
SIX5Q8N196 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.46□□□□□ -1.54
SIX5Q8N196 AL391684.1-202ENST00000641293 1636 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 AC068870.1-201ENST00000563737 2455 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SIX5Q8N196 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SIX5Q8N196 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SIX5Q8N196 UBE2L2-201ENST00000254302 429 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SIX5Q8N196 RNU5A-1-201ENST00000362698 116 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 Y_RNA.48-201ENST00000362710 103 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 RNY1P16-201ENST00000363063 111 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 RNU4-42P-201ENST00000364738 142 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 Y_RNA.324-201ENST00000365165 102 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 RNA5SP223-201ENST00000365174 120 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 RNA5SP455-201ENST00000365190 119 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SIX5Q8N196 SNORA36C-201ENST00000384289 132 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 RNU6-325P-201ENST00000411132 105 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.46□□□□□ -1.54
SIX5Q8N196 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.46□□□□□ -1.54
SIX5Q8N196 UBE2D3P2-201ENST00000424409 445 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 DNAJC19P7-201ENST00000428811 344 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.46□□□□□ -1.54
SIX5Q8N196 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.46□□□□□ -1.54
SIX5Q8N196 AC073910.1-201ENST00000445047 438 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SIX5Q8N196 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.46□□□□□ -1.54
SIX5Q8N196 AC083829.1-201ENST00000503756 657 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 TOMM22P4-201ENST00000511318 336 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 OR7H2P-201ENST00000513483 306 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 RNU6-408P-201ENST00000515910 100 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.46□□□□□ -1.54
SIX5Q8N196 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SIX5Q8N196 CBX3P8-201ENST00000532412 525 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.46□□□□□ -1.54
SIX5Q8N196 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.46□□□□□ -1.54
SIX5Q8N196 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.46□□□□□ -1.54
SIX5Q8N196 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.46□□□□□ -1.54
SIX5Q8N196 AC006600.1-201ENST00000572529 153 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.46□□□□□ -1.54
SIX5Q8N196 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.46□□□□□ -1.54
SIX5Q8N196 AC107294.1-201ENST00000609524 467 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 AC078938.1-201ENST00000620993 318 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 FP236240.3-201ENST00000623061 327 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 AC138627.2-201ENST00000624202 601 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms