Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 PRO1804-201ENST00000623780 2050 ntBASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 RNA5SP205-201ENST00000364653 136 ntBASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 Y_RNA.273-201ENST00000364703 102 ntBASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 AC019155.1-201ENST00000382242 574 ntBASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 Y_RNA.400-201ENST00000383963 111 ntBASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 MIR135A2-201ENST00000384854 100 ntBASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 AL009179.1-201ENST00000406085 265 ntBASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 AL133173.1-201ENST00000423458 397 ntBASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 AL450023.1-201ENST00000450868 751 ntBASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 RNY3P16-201ENST00000516338 101 ntBASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 MRPS21P7-201ENST00000566937 238 ntBASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 MIR6748-201ENST00000610433 71 ntBASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 CU639417.4-201ENST00000623928 207 ntBASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 ZNF826P-207ENST00000622273 1910 ntBASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 AC092070.2-203ENST00000598377 3644 ntBASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SCUBE3Q8IX30 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 AC010329.2-201ENST00000595195 2737 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 AC232271.1-201ENST00000602455 2715 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 RNU6-37P-201ENST00000362692 107 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 RNU6-11P-201ENST00000364234 107 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 RNU6-7-201ENST00000364784 107 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 RNU6-8-201ENST00000365467 107 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 RNU6-827P-201ENST00000365553 106 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 RNU6-25P-201ENST00000383873 107 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 RNU6-1-201ENST00000383898 107 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 RNU6-36P-201ENST00000384172 107 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 RNU6-4P-201ENST00000384205 107 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 RNU6-5P-201ENST00000384238 107 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 RNU6-3P-201ENST00000384314 107 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 RNU6-16P-201ENST00000384385 107 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 RNU6-15P-201ENST00000384534 107 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 RNU6-2-201ENST00000384627 107 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 RNU6-29P-201ENST00000384637 107 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 RNU6-9-201ENST00000384776 107 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 MT-TC-201ENST00000387405 66 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 RNU6-821P-201ENST00000390995 107 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 AL358453.1-201ENST00000422522 250 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 CFL1P1-202ENST00000432948 411 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 BTF3P6-201ENST00000448054 499 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 AC010683.1-201ENST00000473673 378 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 RN7SL860P-201ENST00000473738 223 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 RNU6-919P-201ENST00000516731 104 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 AC090617.3-201ENST00000573670 475 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 RPL7P50-201ENST00000600588 727 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 FO393422.1-201ENST00000603908 708 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 RNU6-6P-201ENST00000606623 107 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 AC025574.2-201ENST00000615621 514 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 AC000095.2-202ENST00000637415 154 ntBASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SCUBE3Q8IX30 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SCUBE3Q8IX30 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
SCUBE3Q8IX30 OR4F13P-202ENST00000560066 2054 ntBASIC5.87□□□□□ -1.47
SCUBE3Q8IX30 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.87□□□□□ -1.47
SCUBE3Q8IX30 AC083843.3-201ENST00000623679 2186 ntBASIC5.87□□□□□ -1.47
SCUBE3Q8IX30 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SCUBE3Q8IX30 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCUBE3Q8IX30 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
SCUBE3Q8IX30 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.87□□□□□ -1.47
SCUBE3Q8IX30 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCUBE3Q8IX30 SNORA25.1-201ENST00000362326 128 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms