Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 VN1R84P-201ENST00000593697 235 ntBASIC1.04□□□□□ -2.24
CSMD3Q7Z407 AL133393.1-201ENST00000603277 287 ntBASIC1.04□□□□□ -2.24
CSMD3Q7Z407 AC011890.2-201ENST00000613393 294 ntBASIC1.04□□□□□ -2.24
CSMD3Q7Z407 AC025016.1-201ENST00000616746 682 ntBASIC1.04□□□□□ -2.24
CSMD3Q7Z407 RNA5SP139-201ENST00000364340 117 ntBASIC1.04□□□□□ -2.24
CSMD3Q7Z407 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
CSMD3Q7Z407 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.04□□□□□ -2.24
CSMD3Q7Z407 AC096992.1-201ENST00000459808 709 ntBASIC1.04□□□□□ -2.24
CSMD3Q7Z407 AC146507.1-201ENST00000468335 354 ntBASIC1.04□□□□□ -2.24
CSMD3Q7Z407 RPS29P20-201ENST00000489592 171 ntBASIC1.04□□□□□ -2.24
CSMD3Q7Z407 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.04□□□□□ -2.24
CSMD3Q7Z407 AC109471.1-201ENST00000511631 612 ntBASIC1.04□□□□□ -2.24
CSMD3Q7Z407 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.04□□□□□ -2.24
CSMD3Q7Z407 AC025423.2-201ENST00000537570 439 ntBASIC1.04□□□□□ -2.24
CSMD3Q7Z407 RNF6P1-201ENST00000444889 1784 ntBASIC1.04□□□□□ -2.24
CSMD3Q7Z407 MIR92A2-201ENST00000385299 75 ntBASIC1.03□□□□□ -2.24
CSMD3Q7Z407 RNU6-882P-201ENST00000391025 103 ntBASIC1.03□□□□□ -2.24
CSMD3Q7Z407 RNU2-25P-201ENST00000411041 191 ntBASIC1.03□□□□□ -2.24
CSMD3Q7Z407 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.03□□□□□ -2.24
CSMD3Q7Z407 RPS3AP44-201ENST00000425466 790 ntBASIC1.03□□□□□ -2.24
CSMD3Q7Z407 AL513185.2-201ENST00000425543 193 ntBASIC1.03□□□□□ -2.24
CSMD3Q7Z407 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.03□□□□□ -2.24
CSMD3Q7Z407 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.03□□□□□ -2.24
CSMD3Q7Z407 AC068135.2-201ENST00000569293 1028 ntBASIC1.03□□□□□ -2.24
CSMD3Q7Z407 AC099654.7-201ENST00000635788 2127 ntBASIC1.03□□□□□ -2.24
CSMD3Q7Z407 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.03□□□□□ -2.24
CSMD3Q7Z407 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
CSMD3Q7Z407 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CSMD3Q7Z407 CCNB2P1-201ENST00000399411 1150 ntBASIC1.03□□□□□ -2.24
CSMD3Q7Z407 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.03□□□□□ -2.24
CSMD3Q7Z407 CKS1BP5-201ENST00000434172 273 ntBASIC1.03□□□□□ -2.24
CSMD3Q7Z407 GTF2IP7-202ENST00000436677 309 ntBASIC1.03□□□□□ -2.24
CSMD3Q7Z407 AL109741.2-201ENST00000455561 343 ntBASIC1.03□□□□□ -2.24
CSMD3Q7Z407 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.03□□□□□ -2.24
CSMD3Q7Z407 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.03□□□□□ -2.24
CSMD3Q7Z407 AC069528.1-202ENST00000482888 637 ntBASIC1.03□□□□□ -2.24
CSMD3Q7Z407 MTCO3P44-201ENST00000510977 541 ntBASIC1.03□□□□□ -2.24
CSMD3Q7Z407 AC087854.1-201ENST00000519706 414 ntBASIC1.03□□□□□ -2.24
CSMD3Q7Z407 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.03□□□□□ -2.24
CSMD3Q7Z407 AC023813.2-201ENST00000564321 469 ntBASIC1.03□□□□□ -2.24
CSMD3Q7Z407 MAGOH2P-202ENST00000584384 429 ntBASIC1.03□□□□□ -2.24
CSMD3Q7Z407 AL031274.2-201ENST00000599419 203 ntBASIC1.03□□□□□ -2.24
CSMD3Q7Z407 AL355816.1-201ENST00000607951 118 ntBASIC1.03□□□□□ -2.24
CSMD3Q7Z407 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.03□□□□□ -2.24
CSMD3Q7Z407 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.03□□□□□ -2.25
CSMD3Q7Z407 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC1.03□□□□□ -2.25
CSMD3Q7Z407 CALM1P1-201ENST00000442082 433 ntBASIC1.03□□□□□ -2.25
CSMD3Q7Z407 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.03□□□□□ -2.25
CSMD3Q7Z407 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.03□□□□□ -2.25
CSMD3Q7Z407 AC008687.2-201ENST00000597865 520 ntBASIC1.03□□□□□ -2.25
CSMD3Q7Z407 AC011468.4-201ENST00000603942 409 ntBASIC1.03□□□□□ -2.25
CSMD3Q7Z407 AC121761.2-201ENST00000617300 689 ntBASIC1.03□□□□□ -2.25
CSMD3Q7Z407 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.03□□□□□ -2.25
CSMD3Q7Z407 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
CSMD3Q7Z407 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
CSMD3Q7Z407 AC138915.1-201ENST00000565427 1685 ntBASIC1.03□□□□□ -2.25
CSMD3Q7Z407 MTND4P34-201ENST00000572715 1371 ntBASIC1.03□□□□□ -2.25
CSMD3Q7Z407 MIR517C-201ENST00000385103 95 ntBASIC1.02□□□□□ -2.25
CSMD3Q7Z407 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.02□□□□□ -2.25
CSMD3Q7Z407 MTND4LP13-201ENST00000425022 298 ntBASIC1.02□□□□□ -2.25
CSMD3Q7Z407 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.02□□□□□ -2.25
CSMD3Q7Z407 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.02□□□□□ -2.25
CSMD3Q7Z407 FTH1P12-201ENST00000432137 551 ntBASIC1.02□□□□□ -2.25
CSMD3Q7Z407 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.02□□□□□ -2.25
CSMD3Q7Z407 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.02□□□□□ -2.25
CSMD3Q7Z407 MTCYBP35-201ENST00000503630 1137 ntBASIC1.02□□□□□ -2.25
CSMD3Q7Z407 FABP5P6-201ENST00000510588 409 ntBASIC1.02□□□□□ -2.25
CSMD3Q7Z407 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.02□□□□□ -2.25
CSMD3Q7Z407 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.02□□□□□ -2.25
CSMD3Q7Z407 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
CSMD3Q7Z407 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.02□□□□□ -2.25
CSMD3Q7Z407 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.02□□□□□ -2.25
CSMD3Q7Z407 AL354685.2-201ENST00000448218 1447 ntBASIC1.02□□□□□ -2.25
CSMD3Q7Z407 MTND5P10-201ENST00000603719 1809 ntBASIC1.02□□□□□ -2.25
CSMD3Q7Z407 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.02□□□□□ -2.25
CSMD3Q7Z407 RNU6-461P-201ENST00000364195 107 ntBASIC1.02□□□□□ -2.25
CSMD3Q7Z407 RNU1-78P-201ENST00000391248 165 ntBASIC1.02□□□□□ -2.25
CSMD3Q7Z407 AC240504.1-201ENST00000395709 845 ntBASIC1.02□□□□□ -2.25
CSMD3Q7Z407 RPL31P52-201ENST00000407532 367 ntBASIC1.02□□□□□ -2.25
CSMD3Q7Z407 AL353898.1-201ENST00000444055 238 ntBASIC1.02□□□□□ -2.25
CSMD3Q7Z407 RPS3AP22-201ENST00000488297 769 ntBASIC1.02□□□□□ -2.25
CSMD3Q7Z407 AC021087.2-201ENST00000504656 1203 ntBASIC1.02□□□□□ -2.25
CSMD3Q7Z407 AC108078.1-201ENST00000508073 725 ntBASIC1.02□□□□□ -2.25
CSMD3Q7Z407 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.02□□□□□ -2.25
CSMD3Q7Z407 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CSMD3Q7Z407 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.02□□□□□ -2.25
CSMD3Q7Z407 MIR4474-201ENST00000579189 78 ntBASIC1.02□□□□□ -2.25
CSMD3Q7Z407 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.02□□□□□ -2.25
CSMD3Q7Z407 AC012493.3-201ENST00000604494 112 ntBASIC1.02□□□□□ -2.25
CSMD3Q7Z407 STMN1P1-201ENST00000617809 440 ntBASIC1.02□□□□□ -2.25
CSMD3Q7Z407 U8.1-201ENST00000362843 134 ntBASIC1.02□□□□□ -2.25
CSMD3Q7Z407 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CSMD3Q7Z407 AL591034.1-201ENST00000407447 340 ntBASIC1.02□□□□□ -2.25
CSMD3Q7Z407 ARL2BPP4-201ENST00000506854 471 ntBASIC1.02□□□□□ -2.25
CSMD3Q7Z407 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.02□□□□□ -2.25
CSMD3Q7Z407 MIR3660-201ENST00000584845 100 ntBASIC1.02□□□□□ -2.25
CSMD3Q7Z407 MTCYBP45-201ENST00000435243 565 ntBASIC1.01□□□□□ -2.25
CSMD3Q7Z407 ARPC3P2-201ENST00000457786 533 ntBASIC1.01□□□□□ -2.25
CSMD3Q7Z407 RNU6-943P-201ENST00000516960 98 ntBASIC1.01□□□□□ -2.25
CSMD3Q7Z407 SNORA31.24-201ENST00000517232 57 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms