Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 AL645937.1-201ENST00000641739 1652 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 AC073544.1-201ENST00000600110 1595 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 AL354685.2-201ENST00000448218 1447 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 RPL7P26-201ENST00000333817 754 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 Y_RNA.86-201ENST00000363020 111 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 RNU6-797P-201ENST00000363101 109 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 RNU6-335P-201ENST00000364563 113 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 RNA5SP505-201ENST00000364748 108 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 MIR129-1-201ENST00000384972 72 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 MIR454-201ENST00000390180 115 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 RNU6-328P-201ENST00000390887 106 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 MTCYBP8-201ENST00000422855 651 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 AC087650.1-201ENST00000431445 468 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 ATP5JP1-201ENST00000431631 322 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 AL162389.1-201ENST00000449233 177 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 RPL23AP81-201ENST00000455252 467 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 RPS20P20-201ENST00000460498 340 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 RPS29P19-201ENST00000479709 171 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 NIPA2P2-201ENST00000496376 1083 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 MTCO2P30-201ENST00000503662 364 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 AC116562.3-201ENST00000506136 177 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 RNU6-875P-201ENST00000516488 106 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 AC068587.5-201ENST00000528506 175 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 OR5BN1P-201ENST00000532955 829 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 UBE2V2P2-201ENST00000587677 504 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 AC244505.7-201ENST00000599675 272 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 AC010591.1-201ENST00000603941 649 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 HMGB1P50-201ENST00000605814 607 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 AL450472.3-201ENST00000615578 367 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 uc_338.13-201ENST00000618243 179 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 AC006504.8-201ENST00000621046 635 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 AC112200.1-201ENST00000625015 234 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 DDX10P1-201ENST00000448545 1933 ntBASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTCHD4Q6ZW05 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 OTUD4P1-201ENST00000237841 3067 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 NACAP2-201ENST00000318548 624 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 RNU6-188P-201ENST00000364207 107 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 SNORA62.1-201ENST00000364287 154 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 RNU5E-6P-201ENST00000365574 115 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 RNA5SP118-201ENST00000410385 109 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 MTND3P23-201ENST00000431980 347 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 PMCHL2-203ENST00000457791 237 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 RPS29P15-201ENST00000458329 171 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 AC008481.1-201ENST00000463278 396 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 RN7SL610P-201ENST00000463845 291 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 MRPS17P3-201ENST00000465453 385 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 AP000852.1-201ENST00000472460 573 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 AL163973.1-201ENST00000484753 577 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 RPL39P36-201ENST00000490784 156 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 HMGN1P12-201ENST00000499125 195 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 AL592156.1-201ENST00000508758 304 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 AC015917.1-201ENST00000579654 510 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 AC104662.1-201ENST00000604448 511 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 AL445363.3-201ENST00000623080 671 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 AL773545.4-201ENST00000637262 310 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 AL513478.4-201ENST00000641636 310 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 MFSD8-216ENST00000641147 4009 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 BDP1P-201ENST00000582658 1990 ntBASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 RIOK3P1-201ENST00000418778 1528 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms