Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF20Q5VTR2 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
RNF20Q5VTR2 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 SNORA51.1-201ENST00000363243 140 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 RNY3P11-201ENST00000364153 102 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 RNU6-1303P-201ENST00000364841 107 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 RNA5SP455-201ENST00000365190 119 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 Y_RNA.376-201ENST00000365638 108 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 RNU6-190P-201ENST00000384154 102 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 Y_RNA.515-201ENST00000384535 112 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 AL353997.1-201ENST00000432936 108 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 MTND5P15-201ENST00000434246 349 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 AP000926.1-201ENST00000479573 241 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 RNA5SP249-201ENST00000516127 99 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 RNA5SP34-201ENST00000516887 130 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 MIR5188-201ENST00000583467 113 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 AC006116.3-201ENST00000592968 361 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 ELOCP5-201ENST00000604924 333 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 MIR6862-1-201ENST00000613016 70 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 AL355810.1-201ENST00000614629 552 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 MIR6862-2-201ENST00000614755 70 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 AL591926.8-201ENST00000616876 211 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 AC137590.2-201ENST00000619709 240 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 MIR6886-201ENST00000619864 61 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 U2.22-201ENST00000636441 106 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 DDX10P1-201ENST00000448545 1933 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF20Q5VTR2 AC009951.1-201ENST00000623674 2614 ntBASIC5.91□□□□□ -1.46
RNF20Q5VTR2 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
RNF20Q5VTR2 AC097461.1-201ENST00000568928 2821 ntBASIC5.9□□□□□ -1.46
RNF20Q5VTR2 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RNF20Q5VTR2 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.9□□□□□ -1.46
RNF20Q5VTR2 Y_RNA.26-201ENST00000362539 101 ntBASIC5.9□□□□□ -1.46
RNF20Q5VTR2 Y_RNA.214-201ENST00000364201 112 ntBASIC5.9□□□□□ -1.46
RNF20Q5VTR2 RNU6-339P-201ENST00000384310 107 ntBASIC5.9□□□□□ -1.46
RNF20Q5VTR2 BX276092.3-201ENST00000424182 230 ntBASIC5.9□□□□□ -1.46
RNF20Q5VTR2 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF20Q5VTR2 AL591704.1-201ENST00000432574 275 ntBASIC5.9□□□□□ -1.46
RNF20Q5VTR2 AL645568.3-201ENST00000433683 316 ntBASIC5.9□□□□□ -1.46
RNF20Q5VTR2 CYCSP43-201ENST00000438233 310 ntBASIC5.9□□□□□ -1.46
RNF20Q5VTR2 NEFMP1-201ENST00000443423 1006 ntBASIC5.9□□□□□ -1.46
RNF20Q5VTR2 AC073910.1-201ENST00000445047 438 ntBASIC5.9□□□□□ -1.46
RNF20Q5VTR2 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.9□□□□□ -1.46
RNF20Q5VTR2 AL031274.1-201ENST00000450334 232 ntBASIC5.9□□□□□ -1.46
RNF20Q5VTR2 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF20Q5VTR2 PPIAP21-201ENST00000464473 501 ntBASIC5.9□□□□□ -1.46
RNF20Q5VTR2 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF20Q5VTR2 RPL12P20-201ENST00000475538 479 ntBASIC5.9□□□□□ -1.46
RNF20Q5VTR2 AC018437.1-201ENST00000492214 406 ntBASIC5.9□□□□□ -1.46
RNF20Q5VTR2 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.9□□□□□ -1.46
RNF20Q5VTR2 HMGB3P16-201ENST00000508037 287 ntBASIC5.9□□□□□ -1.46
RNF20Q5VTR2 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RNF20Q5VTR2 AP006587.4-201ENST00000526053 529 ntBASIC5.9□□□□□ -1.46
RNF20Q5VTR2 OR10G5P-201ENST00000532733 358 ntBASIC5.9□□□□□ -1.46
RNF20Q5VTR2 AC005868.1-201ENST00000536421 331 ntBASIC5.9□□□□□ -1.46
RNF20Q5VTR2 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.9□□□□□ -1.46
RNF20Q5VTR2 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF20Q5VTR2 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.9□□□□□ -1.46
RNF20Q5VTR2 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.9□□□□□ -1.46
RNF20Q5VTR2 AC007619.2-201ENST00000605743 379 ntBASIC5.9□□□□□ -1.46
RNF20Q5VTR2 AC093799.2-201ENST00000610062 578 ntBASIC5.9□□□□□ -1.46
RNF20Q5VTR2 MIR6729-201ENST00000618194 65 ntBASIC5.9□□□□□ -1.46
RNF20Q5VTR2 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF20Q5VTR2 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.47
RNF20Q5VTR2 AC133552.1-201ENST00000569988 4007 ntBASIC5.9□□□□□ -1.47
RNF20Q5VTR2 AL137003.2-201ENST00000606924 2538 ntBASIC5.9□□□□□ -1.47
RNF20Q5VTR2 AC107068.1-201ENST00000563286 4218 ntBASIC5.9□□□□□ -1.47
RNF20Q5VTR2 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
RNF20Q5VTR2 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
RNF20Q5VTR2 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
RNF20Q5VTR2 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.9□□□□□ -1.47
RNF20Q5VTR2 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.9□□□□□ -1.47
RNF20Q5VTR2 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.89□□□□□ -1.47
RNF20Q5VTR2 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RNF20Q5VTR2 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF20Q5VTR2 Y_RNA.14-201ENST00000362415 103 ntBASIC5.89□□□□□ -1.47
RNF20Q5VTR2 Y_RNA.48-201ENST00000362710 103 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms