Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 SNORD108-201ENST00000459332 71 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 RNU6-599P-201ENST00000459383 107 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 RNU6-1193P-201ENST00000459461 107 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 SNX5P1-201ENST00000505757 1041 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 DUXAP3-201ENST00000603616 594 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 RNU6-368P-201ENST00000620928 107 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 RNU6-538P-201ENST00000622329 107 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 UBE2FP3-201ENST00000436366 524 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 IFNA20P-201ENST00000436840 528 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 OR5AQ1P-201ENST00000527596 927 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 HSPE1P3-201ENST00000559254 309 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 OR4K8P-201ENST00000578842 1048 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 MTATP6P3-201ENST00000581686 676 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 AL078603.1-201ENST00000603824 313 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 PABPC1P9-201ENST00000426076 1612 ntBASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 MIR1304-201ENST00000408243 91 ntBASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 SNORA31.23-201ENST00000517219 133 ntBASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 AC006329.2-201ENST00000611491 394 ntBASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 U3.15-201ENST00000365398 212 ntBASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 RN7SKP51-201ENST00000410781 304 ntBASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 MTND3P6-201ENST00000485242 339 ntBASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 AC109446.2-201ENST00000567872 497 ntBASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 AL590099.1-201ENST00000615276 138 ntBASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 HMGB3P30-201ENST00000457863 606 ntBASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 AP005660.1-201ENST00000522972 293 ntBASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 AL163153.1-201ENST00000554223 283 ntBASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 MIR4474-201ENST00000579189 78 ntBASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 AL121917.1-203ENST00000605534 577 ntBASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.93□□□□□ -2.26
VPS13DQ5THJ4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 ARPC3P2-201ENST00000457786 533 ntBASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 RPL21P5-201ENST00000554662 472 ntBASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 MIR5194-201ENST00000582634 120 ntBASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 AC113368.1-201ENST00000603736 382 ntBASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 AC016727.2-201ENST00000603988 621 ntBASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 GLYCAM1-201ENST00000546596 285 ntBASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 MIR3935-201ENST00000583472 104 ntBASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 AC243773.3-201ENST00000613270 256 ntBASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 CFTRP2-201ENST00000634304 199 ntBASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 DNAJC19P6-201ENST00000401853 280 ntBASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 AL033519.2-201ENST00000403958 392 ntBASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 HMGB1P45-201ENST00000435986 653 ntBASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 HMGN2P20-201ENST00000437531 273 ntBASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 DPPA3P1-201ENST00000448050 469 ntBASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 AL157700.1-201ENST00000561973 1432 ntBASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 IPO7P1-201ENST00000442031 636 ntBASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 AC090821.2-201ENST00000523552 176 ntBASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 AC007375.1-201ENST00000554513 578 ntBASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 AC006270.2-201ENST00000578523 652 ntBASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 MIR4458-201ENST00000578872 75 ntBASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 MIR3618-201ENST00000580330 88 ntBASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 AC025016.1-201ENST00000616746 682 ntBASIC0.92□□□□□ -2.26
VPS13DQ5THJ4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 RLIMP2-201ENST00000427891 1563 ntBASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 RFESDP1-201ENST00000422350 461 ntBASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 AC243772.1-201ENST00000451620 410 ntBASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 AL359273.1-201ENST00000510918 627 ntBASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 SNORA67.1-201ENST00000364749 141 ntBASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 AF131216.2-201ENST00000512316 564 ntBASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 SNORA6-201ENST00000384033 151 ntBASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 RNY1P4-201ENST00000384595 115 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms