Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 COX6CP14-201ENST00000469580 174 ntBASIC1.97□□□□□ -2.09
NUP188Q5SRE5 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.97□□□□□ -2.09
NUP188Q5SRE5 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.97□□□□□ -2.09
NUP188Q5SRE5 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.97□□□□□ -2.09
NUP188Q5SRE5 AC011712.1-201ENST00000588959 234 ntBASIC1.97□□□□□ -2.09
NUP188Q5SRE5 AC002487.1-201ENST00000604565 994 ntBASIC1.97□□□□□ -2.09
NUP188Q5SRE5 HSPE1P14-201ENST00000605812 302 ntBASIC1.97□□□□□ -2.09
NUP188Q5SRE5 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC1.97□□□□□ -2.09
NUP188Q5SRE5 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.96□□□□□ -2.1
NUP188Q5SRE5 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.96□□□□□ -2.1
NUP188Q5SRE5 AC073264.1-201ENST00000411508 416 ntBASIC1.96□□□□□ -2.1
NUP188Q5SRE5 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
NUP188Q5SRE5 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC1.96□□□□□ -2.1
NUP188Q5SRE5 AC008885.2-201ENST00000509506 930 ntBASIC1.96□□□□□ -2.1
NUP188Q5SRE5 RNU6-943P-201ENST00000516960 98 ntBASIC1.96□□□□□ -2.1
NUP188Q5SRE5 RNU4-60P-201ENST00000517239 135 ntBASIC1.96□□□□□ -2.1
NUP188Q5SRE5 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.96□□□□□ -2.1
NUP188Q5SRE5 RPL21P5-201ENST00000554662 472 ntBASIC1.96□□□□□ -2.1
NUP188Q5SRE5 AC005730.3-201ENST00000583067 366 ntBASIC1.96□□□□□ -2.1
NUP188Q5SRE5 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
NUP188Q5SRE5 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
NUP188Q5SRE5 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
NUP188Q5SRE5 AC006026.1-201ENST00000444025 1803 ntBASIC1.96□□□□□ -2.1
NUP188Q5SRE5 RPL30P3-201ENST00000424262 333 ntBASIC1.95□□□□□ -2.1
NUP188Q5SRE5 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC1.95□□□□□ -2.1
NUP188Q5SRE5 RPL21P103-201ENST00000479921 488 ntBASIC1.95□□□□□ -2.1
NUP188Q5SRE5 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.95□□□□□ -2.1
NUP188Q5SRE5 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.95□□□□□ -2.1
NUP188Q5SRE5 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.95□□□□□ -2.1
NUP188Q5SRE5 RNA5SP108-201ENST00000605921 117 ntBASIC1.95□□□□□ -2.1
NUP188Q5SRE5 AC083806.3-201ENST00000614016 455 ntBASIC1.95□□□□□ -2.1
NUP188Q5SRE5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
NUP188Q5SRE5 MIR517C-201ENST00000385103 95 ntBASIC1.94□□□□□ -2.1
NUP188Q5SRE5 SNORA67.6-201ENST00000391093 99 ntBASIC1.94□□□□□ -2.1
NUP188Q5SRE5 MIR548J-201ENST00000408833 112 ntBASIC1.94□□□□□ -2.1
NUP188Q5SRE5 BX682237.1-201ENST00000415016 335 ntBASIC1.94□□□□□ -2.1
NUP188Q5SRE5 TRGV6-201ENST00000417928 299 ntBASIC1.94□□□□□ -2.1
NUP188Q5SRE5 LSM1P1-201ENST00000438629 273 ntBASIC1.94□□□□□ -2.1
NUP188Q5SRE5 RPS29P29-201ENST00000456396 171 ntBASIC1.94□□□□□ -2.1
NUP188Q5SRE5 SEM1P1-201ENST00000506694 209 ntBASIC1.94□□□□□ -2.1
NUP188Q5SRE5 MTATP6P22-201ENST00000507369 598 ntBASIC1.94□□□□□ -2.1
NUP188Q5SRE5 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.94□□□□□ -2.1
NUP188Q5SRE5 MIR6078-201ENST00000611069 100 ntBASIC1.94□□□□□ -2.1
NUP188Q5SRE5 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC1.94□□□□□ -2.1
NUP188Q5SRE5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
NUP188Q5SRE5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
NUP188Q5SRE5 ELOCP6-201ENST00000429066 328 ntBASIC1.94□□□□□ -2.1
NUP188Q5SRE5 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.94□□□□□ -2.1
NUP188Q5SRE5 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.94□□□□□ -2.1
NUP188Q5SRE5 ELOCP12-201ENST00000458706 328 ntBASIC1.94□□□□□ -2.1
NUP188Q5SRE5 AC093767.1-201ENST00000504523 156 ntBASIC1.94□□□□□ -2.1
NUP188Q5SRE5 OR6C73P-201ENST00000546432 358 ntBASIC1.94□□□□□ -2.1
NUP188Q5SRE5 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC1.94□□□□□ -2.1
NUP188Q5SRE5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
NUP188Q5SRE5 MIR144-201ENST00000384886 86 ntBASIC1.93□□□□□ -2.1
NUP188Q5SRE5 RPL31P52-201ENST00000407532 367 ntBASIC1.93□□□□□ -2.1
NUP188Q5SRE5 HSPE1P1-201ENST00000421494 318 ntBASIC1.93□□□□□ -2.1
NUP188Q5SRE5 RPS6P14-201ENST00000425165 719 ntBASIC1.93□□□□□ -2.1
NUP188Q5SRE5 AL513185.2-201ENST00000425543 193 ntBASIC1.93□□□□□ -2.1
NUP188Q5SRE5 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC1.93□□□□□ -2.1
NUP188Q5SRE5 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.93□□□□□ -2.1
NUP188Q5SRE5 OR4V1P-201ENST00000525394 1140 ntBASIC1.93□□□□□ -2.1
NUP188Q5SRE5 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.93□□□□□ -2.1
NUP188Q5SRE5 NUP58P1-201ENST00000502546 1738 ntBASIC1.93□□□□□ -2.1
NUP188Q5SRE5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
NUP188Q5SRE5 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
NUP188Q5SRE5 RPL23AP47-201ENST00000408017 460 ntBASIC1.92□□□□□ -2.1
NUP188Q5SRE5 CALM1P1-201ENST00000442082 433 ntBASIC1.92□□□□□ -2.1
NUP188Q5SRE5 HMGN2P21-201ENST00000447764 270 ntBASIC1.92□□□□□ -2.1
NUP188Q5SRE5 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
NUP188Q5SRE5 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
NUP188Q5SRE5 AL359273.1-201ENST00000510918 627 ntBASIC1.92□□□□□ -2.1
NUP188Q5SRE5 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.92□□□□□ -2.1
NUP188Q5SRE5 FAM106CP-201ENST00000582212 507 ntBASIC1.92□□□□□ -2.1
NUP188Q5SRE5 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NUP188Q5SRE5 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NUP188Q5SRE5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
NUP188Q5SRE5 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NUP188Q5SRE5 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NUP188Q5SRE5 Y_RNA.30-201ENST00000362572 97 ntBASIC1.91□□□□□ -2.1
NUP188Q5SRE5 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
NUP188Q5SRE5 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.91□□□□□ -2.1
NUP188Q5SRE5 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC1.91□□□□□ -2.1
NUP188Q5SRE5 RBM43P1-201ENST00000476891 1081 ntBASIC1.91□□□□□ -2.1
NUP188Q5SRE5 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC1.91□□□□□ -2.1
NUP188Q5SRE5 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.91□□□□□ -2.1
NUP188Q5SRE5 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.91□□□□□ -2.1
NUP188Q5SRE5 AC109446.2-201ENST00000567872 497 ntBASIC1.91□□□□□ -2.1
NUP188Q5SRE5 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC1.91□□□□□ -2.1
NUP188Q5SRE5 AC008121.3-201ENST00000618726 433 ntBASIC1.91□□□□□ -2.1
NUP188Q5SRE5 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.91□□□□□ -2.1
NUP188Q5SRE5 Y_RNA.178-201ENST00000363832 102 ntBASIC1.91□□□□□ -2.1
NUP188Q5SRE5 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.91□□□□□ -2.1
NUP188Q5SRE5 AC019176.1-201ENST00000518519 225 ntBASIC1.91□□□□□ -2.1
NUP188Q5SRE5 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.91□□□□□ -2.1
NUP188Q5SRE5 AC139103.1-201ENST00000534696 1030 ntBASIC1.91□□□□□ -2.1
NUP188Q5SRE5 MTCO3P24-201ENST00000572729 782 ntBASIC1.91□□□□□ -2.1
NUP188Q5SRE5 AC012493.3-201ENST00000604494 112 ntBASIC1.91□□□□□ -2.1
NUP188Q5SRE5 AC068944.2-201ENST00000610373 403 ntBASIC1.91□□□□□ -2.1
NUP188Q5SRE5 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms