Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 MIR410-201ENST00000362222 80 ntBASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 RNU6-1301P-201ENST00000362724 104 ntBASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 RNU6-1243P-201ENST00000364028 107 ntBASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 RNU6-1293P-201ENST00000384077 107 ntBASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 RNU1-74P-201ENST00000384108 171 ntBASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 MIR578-201ENST00000384828 96 ntBASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 AL121835.1-201ENST00000404250 354 ntBASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 AL353621.1-201ENST00000418219 243 ntBASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 CYCSP43-201ENST00000438233 310 ntBASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 AC022795.1-201ENST00000473808 480 ntBASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 AC090617.3-201ENST00000573670 475 ntBASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 RN7SL652P-201ENST00000577769 300 ntBASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 MIR15A-201ENST00000607334 83 ntBASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 RNU6-156P-201ENST00000621869 107 ntBASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 AC039056.2-201ENST00000622261 511 ntBASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 AC132068.1-201ENST00000623805 459 ntBASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 AC083843.3-201ENST00000623679 2186 ntBASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 C4BPAP1-201ENST00000415474 1893 ntBASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 RNA5SP319-201ENST00000362768 119 ntBASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 Y_RNA.136-201ENST00000363444 102 ntBASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 SNORD51-201ENST00000384320 80 ntBASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 RNU6-21P-201ENST00000384710 107 ntBASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 RNU11-4P-201ENST00000391149 133 ntBASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 AC009804.1-201ENST00000400949 179 ntBASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 DUTP5-201ENST00000406790 469 ntBASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 RNU4-30P-201ENST00000410245 143 ntBASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 RPL30P13-201ENST00000418873 348 ntBASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 RPL7L1P9-201ENST00000431298 745 ntBASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 SEPT7P4-201ENST00000437076 306 ntBASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 AL596266.1-201ENST00000448132 400 ntBASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 AC053481.1-201ENST00000467217 306 ntBASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 RPS4XP1-201ENST00000482189 787 ntBASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 TRBV5-2-201ENST00000489095 273 ntBASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 AC008953.1-201ENST00000497334 318 ntBASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 RNU7-175P-201ENST00000515915 61 ntBASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 IGLV3-24-201ENST00000517477 197 ntBASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 AC092470.1-201ENST00000546187 132 ntBASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 AC127455.1-201ENST00000565496 145 ntBASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 MIR4423-201ENST00000580922 80 ntBASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 AC009314.1-201ENST00000603871 304 ntBASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNFT1Q5M7Z0 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 AC107027.3-201ENST00000565095 3473 ntBASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms