Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 AL022722.2-201ENST00000402519 180 ntBASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 RNA5SP494-201ENST00000410653 129 ntBASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 Y_RNA.623-201ENST00000411128 95 ntBASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 AC007919.1-201ENST00000429380 217 ntBASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 MTND3P9-201ENST00000429526 346 ntBASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 H2AFZP5-201ENST00000446960 382 ntBASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 RNU1-88P-201ENST00000459274 128 ntBASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 AC010285.1-201ENST00000470580 392 ntBASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 RNU6-1256P-201ENST00000516539 103 ntBASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 RNA5SP290-201ENST00000517133 127 ntBASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 AC109329.1-201ENST00000518744 317 ntBASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 AC126615.2-201ENST00000553003 515 ntBASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 MIR6826-201ENST00000617808 98 ntBASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 SDR42E1P4-201ENST00000620894 481 ntBASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 AC093535.2-201ENST00000624769 2326 ntBASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 AC114947.2-201ENST00000565748 2125 ntBASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TMEM259Q4ZIN3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.71□□□□□ -1.49
TMEM259Q4ZIN3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
TMEM259Q4ZIN3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 RNU6-212P-201ENST00000362642 104 ntBASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 RN7SKP227-201ENST00000364445 330 ntBASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 RN7SKP124-201ENST00000364730 341 ntBASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 MIR10A-201ENST00000385043 110 ntBASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 AL627311.1-201ENST00000431514 115 ntBASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 NDUFB1P2-201ENST00000449477 176 ntBASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 FABP5P15-201ENST00000453566 214 ntBASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 AC006539.1-201ENST00000481419 501 ntBASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 RPL21P13-201ENST00000488305 481 ntBASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 HMGB3P17-201ENST00000504195 649 ntBASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 AC034114.1-201ENST00000520293 285 ntBASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 AC025755.1-201ENST00000521306 278 ntBASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 IGKV2-18-201ENST00000522607 343 ntBASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 HIGD1AP5-201ENST00000529959 259 ntBASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 MIR4489-201ENST00000578869 62 ntBASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 AC006557.5-201ENST00000603126 811 ntBASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 AL355877.2-201ENST00000603670 358 ntBASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM259Q4ZIN3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 AC026523.2-201ENST00000625039 7739 ntBASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 Z75746.1-201ENST00000440243 2080 ntBASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 Y_RNA.183-201ENST00000363882 113 ntBASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 SNORD14B-201ENST00000364533 90 ntBASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 RNA5SP30-201ENST00000365552 115 ntBASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 RNU6-708P-201ENST00000384217 107 ntBASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 RNU6-611P-201ENST00000384276 104 ntBASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 Y_RNA.478-201ENST00000384358 107 ntBASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 BX510359.3-201ENST00000422168 306 ntBASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 AL356867.1-201ENST00000429623 299 ntBASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 RPS20P22-201ENST00000473700 357 ntBASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 RNU6-513P-201ENST00000516104 104 ntBASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 AC091144.1-201ENST00000519573 138 ntBASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 MIR3921-201ENST00000577308 85 ntBASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 PRPF19P1-201ENST00000584766 898 ntBASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 HMGB2P1-201ENST00000591146 634 ntBASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 AC006115.2-201ENST00000596823 202 ntBASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 AL161629.2-201ENST00000615347 275 ntBASIC5.7□□□□□ -1.5
TMEM259Q4ZIN3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms