Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 AL445433.1-201ENST00000457507 257 ntBASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 Y_RNA.638-201ENST00000459374 113 ntBASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 GLUD1P3-202ENST00000508551 200 ntBASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 Y_RNA.686-201ENST00000516548 134 ntBASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 HMGB1P40-201ENST00000525121 540 ntBASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 AC009127.3-201ENST00000570531 403 ntBASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 AC011447.4-201ENST00000587562 111 ntBASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 AC012119.1-201ENST00000603184 222 ntBASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 AC130650.2-201ENST00000618736 2403 ntBASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 RN7SKP104-201ENST00000362605 328 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 SNORA17.1-201ENST00000362945 126 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 RNVU1-6-201ENST00000364688 164 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 SNORD116-14-201ENST00000383894 92 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 SNORD116-17-201ENST00000383929 92 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 SNORA51.8-201ENST00000384234 132 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 SNORD116-15-201ENST00000384445 92 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 SNORD116-20-201ENST00000384529 92 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 SNORD116-19-201ENST00000384729 92 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 RPL12P18-201ENST00000437175 325 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 AC010409.1-201ENST00000487382 476 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 OR7H2P-201ENST00000513483 306 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 RNU6-1234P-201ENST00000516877 103 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 AL442163.3-201ENST00000554110 156 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 FAM60BP-201ENST00000578364 658 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 CPDP1-201ENST00000579660 283 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 MIR3613-201ENST00000579844 87 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 NF1P5-201ENST00000588287 448 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 AC087783.2-201ENST00000605070 562 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 BRDTP1-201ENST00000605735 677 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 Y_RNA.772-201ENST00000606692 102 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 AL590099.1-201ENST00000615276 138 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 FP236240.3-201ENST00000623061 327 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CTC1Q2NKJ3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 RNU4-90P-201ENST00000362773 141 ntBASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 U3.13-201ENST00000364804 214 ntBASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 AC019155.1-201ENST00000382242 574 ntBASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 Y_RNA.435-201ENST00000384095 112 ntBASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 AC013442.1-201ENST00000397347 228 ntBASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 RNU6-325P-201ENST00000411132 105 ntBASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 AC091390.1-201ENST00000433904 331 ntBASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 PIGFP3-201ENST00000441918 722 ntBASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 DUTP1-201ENST00000493631 470 ntBASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 AC093767.1-201ENST00000504523 156 ntBASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 AC023824.2-201ENST00000566185 400 ntBASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 AC074101.1-201ENST00000637861 241 ntBASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms