Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC104685.1-201ENST00000502445 371 ntBASIC2.65□□□□□ -1.99
RAB40BQ12829 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.65□□□□□ -1.99
RAB40BQ12829 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.65□□□□□ -1.99
RAB40BQ12829 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.65□□□□□ -1.99
RAB40BQ12829 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.65□□□□□ -1.99
RAB40BQ12829 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.65□□□□□ -1.99
RAB40BQ12829 AC007458.1-201ENST00000542812 373 ntBASIC2.65□□□□□ -1.99
RAB40BQ12829 NCAPGP2-201ENST00000557911 754 ntBASIC2.65□□□□□ -1.99
RAB40BQ12829 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.65□□□□□ -1.99
RAB40BQ12829 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.65□□□□□ -1.99
RAB40BQ12829 GLUD1P4-201ENST00000590914 418 ntBASIC2.65□□□□□ -1.99
RAB40BQ12829 AC024220.1-201ENST00000603675 484 ntBASIC2.65□□□□□ -1.99
RAB40BQ12829 ELOCP35-201ENST00000604289 336 ntBASIC2.65□□□□□ -1.99
RAB40BQ12829 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.65□□□□□ -1.99
RAB40BQ12829 AC091046.2-201ENST00000620775 665 ntBASIC2.65□□□□□ -1.99
RAB40BQ12829 AC244100.1-202ENST00000621554 382 ntBASIC2.65□□□□□ -1.99
RAB40BQ12829 AP003122.6-201ENST00000623831 495 ntBASIC2.65□□□□□ -1.99
RAB40BQ12829 AC018692.3-201ENST00000623929 123 ntBASIC2.65□□□□□ -1.99
RAB40BQ12829 AL356596.1-201ENST00000624230 379 ntBASIC2.65□□□□□ -1.99
RAB40BQ12829 AC019226.1-201ENST00000625666 515 ntBASIC2.65□□□□□ -1.99
RAB40BQ12829 PCMTD1P7-201ENST00000634506 357 ntBASIC2.65□□□□□ -1.99
RAB40BQ12829 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.65□□□□□ -1.99
RAB40BQ12829 OR5H6-203ENST00000642105 978 ntBASIC2.65□□□□□ -1.99
RAB40BQ12829 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
RAB40BQ12829 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.65□□□□□ -1.99
RAB40BQ12829 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.65□□□□□ -1.99
RAB40BQ12829 ASNSP3-201ENST00000451989 1306 ntBASIC2.65□□□□□ -1.99
RAB40BQ12829 FAM35BP-202ENST00000497389 3337 ntBASIC2.65□□□□□ -1.99
RAB40BQ12829 AC092435.3-201ENST00000565538 3654 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RAB40BQ12829 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
RAB40BQ12829 RNU6-931P-201ENST00000363850 107 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 RNU6-723P-201ENST00000383973 107 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 MIR34B-201ENST00000385076 84 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 MIR325-201ENST00000385260 98 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
RAB40BQ12829 MTND4P13-201ENST00000402078 1023 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 AL357075.1-201ENST00000404107 726 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 RN7SKP266-201ENST00000410232 287 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 RNU4-47P-201ENST00000410876 114 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 MTND1P21-201ENST00000412991 285 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.64□□□□□ -1.99
RAB40BQ12829 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.64□□□□□ -1.99
RAB40BQ12829 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.64□□□□□ -1.99
RAB40BQ12829 AL512844.2-201ENST00000433990 593 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.64□□□□□ -1.99
RAB40BQ12829 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.64□□□□□ -1.99
RAB40BQ12829 RPL21P10-201ENST00000463521 490 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 AC034244.1-201ENST00000507687 207 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.64□□□□□ -1.99
RAB40BQ12829 MTND5P4-201ENST00000514978 288 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RAB40BQ12829 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.64□□□□□ -1.99
RAB40BQ12829 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.64□□□□□ -1.99
RAB40BQ12829 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.64□□□□□ -1.99
RAB40BQ12829 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.64□□□□□ -1.99
RAB40BQ12829 OR7K1P-201ENST00000546439 926 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.64□□□□□ -1.99
RAB40BQ12829 SETP2-201ENST00000553886 926 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 DNAJC8P1-201ENST00000554535 372 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 AL355836.1-201ENST00000555951 870 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 AC074050.1-201ENST00000563247 211 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 ACTR3BP3-201ENST00000565577 979 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 RPL23AP84-201ENST00000571193 464 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.64□□□□□ -1.99
RAB40BQ12829 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.64□□□□□ -1.99
RAB40BQ12829 AL031281.1-201ENST00000604049 488 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 NUTF2P8-201ENST00000604593 363 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 AC072039.2-201ENST00000608883 439 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 AL139418.1-201ENST00000613613 177 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 MIR7975-201ENST00000619350 68 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.64□□□□□ -1.99
RAB40BQ12829 U6.105-201ENST00000637379 88 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 AC009902.3-201ENST00000606235 2172 ntBASIC2.64□□□□□ -1.99
RAB40BQ12829 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RAB40BQ12829 AL138713.1-201ENST00000624026 2130 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RAB40BQ12829 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.63□□□□□ -1.99
RAB40BQ12829 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
RAB40BQ12829 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RAB40BQ12829 MIR22-201ENST00000362190 85 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 SNORA63.1-201ENST00000362493 131 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 RNU6-799P-201ENST00000363567 107 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 RNU1-39P-201ENST00000383897 165 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 RNU6-432P-201ENST00000384196 109 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 RNU6-754P-201ENST00000391166 107 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.63□□□□□ -1.99
RAB40BQ12829 SPA17P1-201ENST00000416656 452 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.63□□□□□ -1.99
RAB40BQ12829 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.63□□□□□ -1.99
RAB40BQ12829 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.63□□□□□ -1.99
RAB40BQ12829 AC097713.2-201ENST00000430199 356 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 RPL35AP22-201ENST00000436855 335 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 RSU1P2-202ENST00000437884 485 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.63□□□□□ -1.99
RAB40BQ12829 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.63□□□□□ -1.99
RAB40BQ12829 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 COX6CP2-201ENST00000444980 225 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms