Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
PCDH1Q08174 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
PCDH1Q08174 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
PCDH1Q08174 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.96□□□□□ -1.61
PCDH1Q08174 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.96□□□□□ -1.61
PCDH1Q08174 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
PCDH1Q08174 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PCDH1Q08174 AC139769.1-204ENST00000472297 1931 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 AC107027.3-201ENST00000565095 3473 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
PCDH1Q08174 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
PCDH1Q08174 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDH1Q08174 SNORA17.1-201ENST00000362945 126 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 RNU6-1249P-201ENST00000363237 111 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 RNU6-596P-201ENST00000365395 98 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 Y_RNA.461-201ENST00000384263 103 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 MIR1286-201ENST00000408112 78 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 PGBD4P6-201ENST00000421501 610 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 BX276092.3-201ENST00000424182 230 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 HMGB1P9-201ENST00000429856 646 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 HMGB1P27-201ENST00000431429 603 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.96□□□□□ -1.62
PCDH1Q08174 SUMO1P3-201ENST00000439961 304 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.96□□□□□ -1.62
PCDH1Q08174 AL163193.1-201ENST00000444895 788 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 AC073910.1-201ENST00000445047 438 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 PRDX3P3-201ENST00000447765 522 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 RPS24P6-201ENST00000452670 400 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 RPL23AP31-201ENST00000456160 467 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 snoU13.3-201ENST00000459441 104 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 FTH1P2-201ENST00000466086 412 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 AC108860.1-201ENST00000484521 383 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 SNORA40.14-201ENST00000516543 86 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 RPL23AP53-201ENST00000521854 457 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.96□□□□□ -1.62
PCDH1Q08174 AC023157.2-201ENST00000540596 141 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDH1Q08174 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.96□□□□□ -1.62
PCDH1Q08174 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDH1Q08174 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.96□□□□□ -1.62
PCDH1Q08174 AC125232.2-201ENST00000592457 143 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.96□□□□□ -1.62
PCDH1Q08174 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PCDH1Q08174 AC015967.1-201ENST00000619893 476 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 AL031601.2-202ENST00000622650 282 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.96□□□□□ -1.62
PCDH1Q08174 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.96□□□□□ -1.62
PCDH1Q08174 AC008669.1-201ENST00000565823 2178 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 AC083843.3-201ENST00000623679 2186 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PCDH1Q08174 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
PCDH1Q08174 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDH1Q08174 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDH1Q08174 AC114947.2-201ENST00000565748 2125 ntBASIC4.96□□□□□ -1.62
PCDH1Q08174 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDH1Q08174 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDH1Q08174 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDH1Q08174 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDH1Q08174 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
PCDH1Q08174 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDH1Q08174 EOGT-210ENST00000615922 1931 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDH1Q08174 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDH1Q08174 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDH1Q08174 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDH1Q08174 AC005332.5-201ENST00000591222 2919 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDH1Q08174 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDH1Q08174 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.95□□□□□ -1.62
PCDH1Q08174 SNORA70E-201ENST00000384492 135 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 SNORD73A-201ENST00000386062 65 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
PCDH1Q08174 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
PCDH1Q08174 MIR548I3-201ENST00000408378 149 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 MIR548I1-201ENST00000408810 149 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 RNU6-174P-201ENST00000410406 106 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDH1Q08174 RPL7AP73-201ENST00000413490 353 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.95□□□□□ -1.62
PCDH1Q08174 AC108032.1-201ENST00000416706 207 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 RPL7P2-201ENST00000427639 268 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDH1Q08174 DAP3P1-201ENST00000441522 278 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDH1Q08174 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDH1Q08174 AL591623.2-201ENST00000449978 222 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 AL031274.1-201ENST00000450334 232 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 CHEK2P4-201ENST00000450340 246 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 COPS8P2-201ENST00000473228 627 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.95□□□□□ -1.62
PCDH1Q08174 AC007686.1-201ENST00000488511 463 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDH1Q08174 AC022447.4-201ENST00000504053 364 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDH1Q08174 RNU6-914P-201ENST00000516749 109 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 AC087369.1-201ENST00000520775 996 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 IGHV3-76-201ENST00000522465 295 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 AC040926.1-201ENST00000530195 238 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDH1Q08174 AC126177.3-201ENST00000551839 688 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms