Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 ASNSP3-201ENST00000451989 1306 ntBASIC3.2□□□□□ -1.9
GABPAQ06546 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.2□□□□□ -1.9
GABPAQ06546 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GABPAQ06546 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GABPAQ06546 RNU6-1155P-201ENST00000363554 107 ntBASIC3.2□□□□□ -1.9
GABPAQ06546 RNU6-343P-201ENST00000364709 104 ntBASIC3.2□□□□□ -1.9
GABPAQ06546 MIR181A2-201ENST00000384863 110 ntBASIC3.2□□□□□ -1.9
GABPAQ06546 BEND7P1-201ENST00000422058 457 ntBASIC3.2□□□□□ -1.9
GABPAQ06546 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.2□□□□□ -1.9
GABPAQ06546 XKRYP1-201ENST00000423438 492 ntBASIC3.2□□□□□ -1.9
GABPAQ06546 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.2□□□□□ -1.9
GABPAQ06546 XKRYP2-201ENST00000432915 492 ntBASIC3.2□□□□□ -1.9
GABPAQ06546 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.2□□□□□ -1.9
GABPAQ06546 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.2□□□□□ -1.9
GABPAQ06546 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.2□□□□□ -1.9
GABPAQ06546 MTND1P31-201ENST00000449206 961 ntBASIC3.2□□□□□ -1.9
GABPAQ06546 RPL23AP35-201ENST00000451906 501 ntBASIC3.2□□□□□ -1.9
GABPAQ06546 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.2□□□□□ -1.9
GABPAQ06546 ANKRD26P4-201ENST00000455755 950 ntBASIC3.2□□□□□ -1.9
GABPAQ06546 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.2□□□□□ -1.9
GABPAQ06546 AC092754.2-201ENST00000463506 460 ntBASIC3.2□□□□□ -1.9
GABPAQ06546 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.2□□□□□ -1.9
GABPAQ06546 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.2□□□□□ -1.9
GABPAQ06546 MTCYBP43-201ENST00000513621 740 ntBASIC3.2□□□□□ -1.9
GABPAQ06546 SNORA31.8-201ENST00000516327 108 ntBASIC3.2□□□□□ -1.9
GABPAQ06546 RNA5SP468-201ENST00000516782 93 ntBASIC3.2□□□□□ -1.9
GABPAQ06546 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.2□□□□□ -1.9
GABPAQ06546 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.2□□□□□ -1.9
GABPAQ06546 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.2□□□□□ -1.9
GABPAQ06546 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.2□□□□□ -1.9
GABPAQ06546 AL354943.1-201ENST00000572103 781 ntBASIC3.2□□□□□ -1.9
GABPAQ06546 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.2□□□□□ -1.9
GABPAQ06546 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.2□□□□□ -1.9
GABPAQ06546 AL353748.2-201ENST00000622148 471 ntBASIC3.2□□□□□ -1.9
GABPAQ06546 MTND4P34-201ENST00000572715 1371 ntBASIC3.2□□□□□ -1.9
GABPAQ06546 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.2□□□□□ -1.9
GABPAQ06546 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
GABPAQ06546 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
GABPAQ06546 MIR135A2-201ENST00000384854 100 ntBASIC3.19□□□□□ -1.9
GABPAQ06546 SSXP9-201ENST00000417503 292 ntBASIC3.19□□□□□ -1.9
GABPAQ06546 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.19□□□□□ -1.9
GABPAQ06546 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.19□□□□□ -1.9
GABPAQ06546 SNRPEP7-201ENST00000438350 220 ntBASIC3.19□□□□□ -1.9
GABPAQ06546 RAC1P7-201ENST00000445367 377 ntBASIC3.19□□□□□ -1.9
GABPAQ06546 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.19□□□□□ -1.9
GABPAQ06546 USP9YP10-201ENST00000454868 628 ntBASIC3.19□□□□□ -1.9
GABPAQ06546 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.19□□□□□ -1.9
GABPAQ06546 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.19□□□□□ -1.9
GABPAQ06546 AC017037.2-201ENST00000513850 890 ntBASIC3.19□□□□□ -1.9
GABPAQ06546 AC239860.2-201ENST00000525886 270 ntBASIC3.19□□□□□ -1.9
GABPAQ06546 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.19□□□□□ -1.9
GABPAQ06546 AC083760.1-201ENST00000589621 670 ntBASIC3.19□□□□□ -1.9
GABPAQ06546 AL596327.1-201ENST00000603629 213 ntBASIC3.19□□□□□ -1.9
GABPAQ06546 AC013244.3-201ENST00000605614 388 ntBASIC3.19□□□□□ -1.9
GABPAQ06546 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.19□□□□□ -1.9
GABPAQ06546 AL607023.1-201ENST00000620045 248 ntBASIC3.19□□□□□ -1.9
GABPAQ06546 AC005858.4-201ENST00000623191 700 ntBASIC3.19□□□□□ -1.9
GABPAQ06546 AC243829.7-201ENST00000633081 225 ntBASIC3.19□□□□□ -1.9
GABPAQ06546 AC103706.2-201ENST00000638080 240 ntBASIC3.19□□□□□ -1.9
GABPAQ06546 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.19□□□□□ -1.9
GABPAQ06546 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
GABPAQ06546 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
GABPAQ06546 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
GABPAQ06546 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
GABPAQ06546 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
GABPAQ06546 SGO1P2-201ENST00000429458 1589 ntBASIC3.18□□□□□ -1.9
GABPAQ06546 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.18□□□□□ -1.9
GABPAQ06546 DDX43P2-201ENST00000604753 1354 ntBASIC3.18□□□□□ -1.9
GABPAQ06546 RNU6-173P-201ENST00000364215 104 ntBASIC3.18□□□□□ -1.9
GABPAQ06546 PIGPP2-201ENST00000411569 458 ntBASIC3.18□□□□□ -1.9
GABPAQ06546 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.18□□□□□ -1.9
GABPAQ06546 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
GABPAQ06546 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.18□□□□□ -1.9
GABPAQ06546 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.18□□□□□ -1.9
GABPAQ06546 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.18□□□□□ -1.9
GABPAQ06546 ARL5AP4-201ENST00000430731 512 ntBASIC3.18□□□□□ -1.9
GABPAQ06546 AL121871.1-201ENST00000443413 436 ntBASIC3.18□□□□□ -1.9
GABPAQ06546 PAXBP1P1-201ENST00000449315 447 ntBASIC3.18□□□□□ -1.9
GABPAQ06546 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.18□□□□□ -1.9
GABPAQ06546 AC126389.1-201ENST00000477436 290 ntBASIC3.18□□□□□ -1.9
GABPAQ06546 KC877373.1-201ENST00000479066 408 ntBASIC3.18□□□□□ -1.9
GABPAQ06546 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.18□□□□□ -1.9
GABPAQ06546 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
GABPAQ06546 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.18□□□□□ -1.9
GABPAQ06546 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.18□□□□□ -1.9
GABPAQ06546 AC105185.1-201ENST00000518705 535 ntBASIC3.18□□□□□ -1.9
GABPAQ06546 MRPS36P3-201ENST00000519284 130 ntBASIC3.18□□□□□ -1.9
GABPAQ06546 EEF1A1P37-201ENST00000522748 715 ntBASIC3.18□□□□□ -1.9
GABPAQ06546 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.18□□□□□ -1.9
GABPAQ06546 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.18□□□□□ -1.9
GABPAQ06546 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.18□□□□□ -1.9
GABPAQ06546 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.18□□□□□ -1.9
GABPAQ06546 MIR4298-201ENST00000584380 73 ntBASIC3.18□□□□□ -1.9
GABPAQ06546 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.18□□□□□ -1.9
GABPAQ06546 AC005046.1-201ENST00000608515 625 ntBASIC3.18□□□□□ -1.9
GABPAQ06546 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.18□□□□□ -1.9
GABPAQ06546 AC106028.5-201ENST00000610332 395 ntBASIC3.18□□□□□ -1.9
GABPAQ06546 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.18□□□□□ -1.9
GABPAQ06546 AC079395.3-201ENST00000615161 484 ntBASIC3.18□□□□□ -1.9
GABPAQ06546 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms