Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.31□□□□□ -1.88
CDK3Q00526 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 AL353777.1-201ENST00000425552 326 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 AL158071.1-201ENST00000430315 461 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.31□□□□□ -1.88
CDK3Q00526 BX510359.1-201ENST00000456973 237 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 RNU7-59P-201ENST00000459101 61 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 RN7SL807P-201ENST00000470923 297 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.31□□□□□ -1.88
CDK3Q00526 RPS15AP36-201ENST00000492022 382 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.31□□□□□ -1.88
CDK3Q00526 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.31□□□□□ -1.88
CDK3Q00526 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.31□□□□□ -1.88
CDK3Q00526 Y_RNA.695-201ENST00000516715 107 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 AC022616.6-201ENST00000520479 119 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.31□□□□□ -1.88
CDK3Q00526 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.31□□□□□ -1.88
CDK3Q00526 AL391156.1-201ENST00000554965 554 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.31□□□□□ -1.88
CDK3Q00526 AC105224.1-201ENST00000587055 421 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 AP001029.3-201ENST00000588063 596 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.31□□□□□ -1.88
CDK3Q00526 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.31□□□□□ -1.88
CDK3Q00526 AC011468.4-201ENST00000603942 409 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 AL359999.1-201ENST00000604513 294 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 AC135507.1-201ENST00000607214 561 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 AC093838.1-201ENST00000613014 469 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.31□□□□□ -1.88
CDK3Q00526 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.31□□□□□ -1.88
CDK3Q00526 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDK3Q00526 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDK3Q00526 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.31□□□□□ -1.88
CDK3Q00526 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.31□□□□□ -1.88
CDK3Q00526 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDK3Q00526 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDK3Q00526 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CDK3Q00526 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDK3Q00526 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CDK3Q00526 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CDK3Q00526 Y_RNA.77-201ENST00000362962 107 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 SNORA23-201ENST00000365128 182 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDK3Q00526 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.3□□□□□ -1.88
CDK3Q00526 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CDK3Q00526 FCF1P10-201ENST00000407590 479 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 Y_RNA.598-201ENST00000410480 95 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 SEPT2P1-201ENST00000419651 180 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 AL365338.1-201ENST00000422282 858 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.3□□□□□ -1.88
CDK3Q00526 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.3□□□□□ -1.88
CDK3Q00526 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.3□□□□□ -1.88
CDK3Q00526 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.3□□□□□ -1.88
CDK3Q00526 MTND1P28-201ENST00000435623 950 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.3□□□□□ -1.88
CDK3Q00526 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.3□□□□□ -1.88
CDK3Q00526 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.3□□□□□ -1.88
CDK3Q00526 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.3□□□□□ -1.88
CDK3Q00526 AP000936.2-201ENST00000447151 681 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 AL162389.1-201ENST00000449233 177 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.3□□□□□ -1.88
CDK3Q00526 RPS4XP2-201ENST00000458402 793 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 HSPE1P6-201ENST00000479457 291 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 NDUFB4P9-201ENST00000511646 388 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 AC107934.2-201ENST00000518653 310 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.3□□□□□ -1.88
CDK3Q00526 AC022878.1-201ENST00000530684 149 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.3□□□□□ -1.88
CDK3Q00526 MIR5195-201ENST00000583555 115 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.3□□□□□ -1.88
CDK3Q00526 AL161756.2-201ENST00000604597 246 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 AC121334.2-201ENST00000605387 271 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 AL391813.2-201ENST00000609113 322 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 AC108747.1-201ENST00000609508 535 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 AC138749.5-201ENST00000611461 208 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 AL442067.2-201ENST00000614033 363 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 TUG1_2.1-201ENST00000614234 87 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 AC116165.2-201ENST00000616705 206 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 AC009878.1-201ENST00000621819 340 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 MIR4275-201ENST00000636486 87 ntBASIC3.3□□□□□ -1.88
CDK3Q00526 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDK3Q00526 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDK3Q00526 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CDK3Q00526 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDK3Q00526 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
CDK3Q00526 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CDK3Q00526 FGF7P2-201ENST00000332473 296 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDK3Q00526 RNU6-223P-201ENST00000362830 107 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 RNU5A-8P-201ENST00000364102 114 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 AL109755.1-201ENST00000401791 649 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK3Q00526 MTCO2P16-201ENST00000436962 677 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.29□□□□□ -1.88
CDK3Q00526 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK3Q00526 RPS3AP12-201ENST00000443616 753 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK3Q00526 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK3Q00526 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK3Q00526 SNRPFP4-201ENST00000456366 242 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 AL122001.1-201ENST00000457027 370 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms