Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.68□□□□□ -1.66
HERVK_113P62684 AC004908.2-201ENST00000609090 574 ntBASIC4.68□□□□□ -1.66
HERVK_113P62684 AC064836.2-201ENST00000609491 462 ntBASIC4.68□□□□□ -1.66
HERVK_113P62684 FP236240.3-201ENST00000623061 327 ntBASIC4.68□□□□□ -1.66
HERVK_113P62684 AC090574.1-201ENST00000623186 233 ntBASIC4.68□□□□□ -1.66
HERVK_113P62684 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.68□□□□□ -1.66
HERVK_113P62684 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.68□□□□□ -1.66
HERVK_113P62684 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.68□□□□□ -1.66
HERVK_113P62684 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HERVK_113P62684 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.68□□□□□ -1.66
HERVK_113P62684 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.68□□□□□ -1.66
HERVK_113P62684 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HERVK_113P62684 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HERVK_113P62684 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.68□□□□□ -1.66
HERVK_113P62684 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HERVK_113P62684 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HERVK_113P62684 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.67□□□□□ -1.66
HERVK_113P62684 AL138713.1-201ENST00000624026 2130 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HERVK_113P62684 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HERVK_113P62684 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HERVK_113P62684 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HERVK_113P62684 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HERVK_113P62684 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.67□□□□□ -1.66
HERVK_113P62684 U3.11-201ENST00000364476 212 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 Y_RNA.333-201ENST00000365274 102 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 RNU6-641P-201ENST00000384006 107 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 RN7SKP156-201ENST00000410308 342 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 RNA5SP104-201ENST00000410989 118 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 SNORA57.3-201ENST00000411095 141 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 AC093578.1-201ENST00000415219 368 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.67□□□□□ -1.66
HERVK_113P62684 AC008065.1-201ENST00000428525 348 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 PSMA2P3-201ENST00000429685 675 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 ELOCP18-201ENST00000434209 337 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.67□□□□□ -1.66
HERVK_113P62684 AC006480.1-201ENST00000449887 378 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.67□□□□□ -1.66
HERVK_113P62684 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.67□□□□□ -1.66
HERVK_113P62684 RPL29P14-201ENST00000495837 428 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 AC068305.1-201ENST00000497406 726 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 AC026427.2-201ENST00000506228 536 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.67□□□□□ -1.66
HERVK_113P62684 RN7SKP82-201ENST00000516786 223 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 Y_RNA.701-201ENST00000516812 110 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.67□□□□□ -1.66
HERVK_113P62684 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.67□□□□□ -1.66
HERVK_113P62684 AC063950.1-201ENST00000552036 308 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.67□□□□□ -1.66
HERVK_113P62684 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.67□□□□□ -1.66
HERVK_113P62684 AC025627.2-201ENST00000576220 160 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.67□□□□□ -1.66
HERVK_113P62684 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.67□□□□□ -1.66
HERVK_113P62684 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.67□□□□□ -1.66
HERVK_113P62684 AC012603.1-201ENST00000606424 528 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 AC103710.2-201ENST00000609912 942 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 AL132765.2-201ENST00000610812 351 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 AC006329.2-201ENST00000611491 394 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 AL442067.2-201ENST00000614033 363 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 AC009248.2-201ENST00000619826 254 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 AC002550.2-201ENST00000621246 394 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 RMST_7.1-201ENST00000621935 268 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 AC090617.10-201ENST00000624308 134 ntBASIC4.67□□□□□ -1.66
HERVK_113P62684 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HERVK_113P62684 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HERVK_113P62684 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HERVK_113P62684 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.67□□□□□ -1.66
HERVK_113P62684 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HERVK_113P62684 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HERVK_113P62684 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HERVK_113P62684 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HERVK_113P62684 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.66□□□□□ -1.66
HERVK_113P62684 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HERVK_113P62684 SAGE2P-201ENST00000420011 2126 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
HERVK_113P62684 Y_RNA.166-201ENST00000363730 102 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 RNU6-1078P-201ENST00000364522 103 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 Y_RNA.460-201ENST00000384255 102 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 AL122016.1-201ENST00000403365 367 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 AC004552.1-201ENST00000419089 348 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 OR1AA1P-201ENST00000419597 916 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 RPS12P5-201ENST00000423449 371 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 EZH2P1-201ENST00000431167 291 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.66□□□□□ -1.66
HERVK_113P62684 AC007677.1-201ENST00000445757 515 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.66□□□□□ -1.66
HERVK_113P62684 AC073415.1-201ENST00000449240 153 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.66□□□□□ -1.66
HERVK_113P62684 RPS26P3-201ENST00000470205 348 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 AC090543.2-201ENST00000483963 348 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 AC004057.1-201ENST00000485827 348 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 RN7SL323P-201ENST00000494712 295 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 FGF7P4-201ENST00000509595 295 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.66□□□□□ -1.66
HERVK_113P62684 AC017037.2-201ENST00000513850 890 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 RNU7-30P-201ENST00000516835 62 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 HMGB1P41-201ENST00000520234 440 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 AC107953.1-201ENST00000522216 297 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 PTP4A1P6-201ENST00000531034 478 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 AP000857.1-201ENST00000532151 543 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms