Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 U3.37-201ENST00000408528 213 ntBASIC2.11□□□□□ -2.07
ACTBP60709 AL357078.2-201ENST00000416486 427 ntBASIC2.11□□□□□ -2.07
ACTBP60709 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.11□□□□□ -2.07
ACTBP60709 SFR1P2-201ENST00000421841 730 ntBASIC2.11□□□□□ -2.07
ACTBP60709 AC024082.2-201ENST00000434771 238 ntBASIC2.11□□□□□ -2.07
ACTBP60709 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.11□□□□□ -2.07
ACTBP60709 AC092155.2-201ENST00000454675 477 ntBASIC2.11□□□□□ -2.07
ACTBP60709 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.11□□□□□ -2.07
ACTBP60709 SNORD109B-201ENST00000458961 67 ntBASIC2.11□□□□□ -2.07
ACTBP60709 SNORD109A-201ENST00000459128 67 ntBASIC2.11□□□□□ -2.07
ACTBP60709 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.11□□□□□ -2.07
ACTBP60709 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.11□□□□□ -2.07
ACTBP60709 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.11□□□□□ -2.07
ACTBP60709 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.11□□□□□ -2.07
ACTBP60709 AC096725.1-201ENST00000514266 313 ntBASIC2.11□□□□□ -2.07
ACTBP60709 RN7SKP132-201ENST00000516001 208 ntBASIC2.11□□□□□ -2.07
ACTBP60709 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.11□□□□□ -2.07
ACTBP60709 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
ACTBP60709 AP000889.1-201ENST00000530968 660 ntBASIC2.11□□□□□ -2.07
ACTBP60709 CYCSP26-201ENST00000534107 320 ntBASIC2.11□□□□□ -2.07
ACTBP60709 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.11□□□□□ -2.07
ACTBP60709 AC243972.3-201ENST00000539655 198 ntBASIC2.11□□□□□ -2.07
ACTBP60709 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.11□□□□□ -2.07
ACTBP60709 AC011611.5-201ENST00000552477 578 ntBASIC2.11□□□□□ -2.07
ACTBP60709 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.11□□□□□ -2.07
ACTBP60709 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.11□□□□□ -2.07
ACTBP60709 MIR4666A-201ENST00000580160 79 ntBASIC2.11□□□□□ -2.07
ACTBP60709 VN1R90P-201ENST00000595717 726 ntBASIC2.11□□□□□ -2.07
ACTBP60709 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
ACTBP60709 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
ACTBP60709 AC012640.5-201ENST00000623897 319 ntBASIC2.11□□□□□ -2.07
ACTBP60709 AL512506.2-201ENST00000624472 458 ntBASIC2.11□□□□□ -2.07
ACTBP60709 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
ACTBP60709 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
ACTBP60709 AC005336.3-201ENST00000623833 2679 ntBASIC2.1□□□□□ -2.07
ACTBP60709 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ACTBP60709 RNU6-353P-201ENST00000364266 108 ntBASIC2.1□□□□□ -2.07
ACTBP60709 AC016769.3-201ENST00000396562 315 ntBASIC2.1□□□□□ -2.07
ACTBP60709 TMSB4XP8-201ENST00000402089 135 ntBASIC2.1□□□□□ -2.07
ACTBP60709 RPS7P9-201ENST00000414704 586 ntBASIC2.1□□□□□ -2.07
ACTBP60709 TMSB4XP6-201ENST00000415187 135 ntBASIC2.1□□□□□ -2.07
ACTBP60709 SPA17P1-201ENST00000416656 452 ntBASIC2.1□□□□□ -2.07
ACTBP60709 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.1□□□□□ -2.07
ACTBP60709 AC246680.2-201ENST00000422106 389 ntBASIC2.1□□□□□ -2.07
ACTBP60709 TMSB4XP1-201ENST00000424567 135 ntBASIC2.1□□□□□ -2.07
ACTBP60709 RAC1P8-201ENST00000427086 527 ntBASIC2.1□□□□□ -2.07
ACTBP60709 TAAR7P-201ENST00000436141 242 ntBASIC2.1□□□□□ -2.07
ACTBP60709 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.1□□□□□ -2.07
ACTBP60709 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.1□□□□□ -2.07
ACTBP60709 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.1□□□□□ -2.07
ACTBP60709 MTCO1P48-201ENST00000448024 1096 ntBASIC2.1□□□□□ -2.07
ACTBP60709 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.1□□□□□ -2.07
ACTBP60709 RFC5P1-201ENST00000454419 874 ntBASIC2.1□□□□□ -2.07
ACTBP60709 ANKRD26P4-201ENST00000455755 950 ntBASIC2.1□□□□□ -2.07
ACTBP60709 SNORA59A-201ENST00000459326 152 ntBASIC2.1□□□□□ -2.07
ACTBP60709 RPL32P14-201ENST00000463196 378 ntBASIC2.1□□□□□ -2.07
ACTBP60709 AC034159.1-201ENST00000513885 583 ntBASIC2.1□□□□□ -2.07
ACTBP60709 SETP12-201ENST00000514068 805 ntBASIC2.1□□□□□ -2.07
ACTBP60709 AC119751.5-201ENST00000514077 770 ntBASIC2.1□□□□□ -2.07
ACTBP60709 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.1□□□□□ -2.07
ACTBP60709 HMGB1P1-201ENST00000522557 636 ntBASIC2.1□□□□□ -2.07
ACTBP60709 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.1□□□□□ -2.07
ACTBP60709 AC068135.2-201ENST00000569293 1028 ntBASIC2.1□□□□□ -2.07
ACTBP60709 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.1□□□□□ -2.07
ACTBP60709 AP002906.1-201ENST00000603405 233 ntBASIC2.1□□□□□ -2.07
ACTBP60709 AC103710.4-201ENST00000609301 899 ntBASIC2.1□□□□□ -2.07
ACTBP60709 AC011330.2-201ENST00000621680 635 ntBASIC2.1□□□□□ -2.07
ACTBP60709 AC007998.5-201ENST00000622938 237 ntBASIC2.1□□□□□ -2.07
ACTBP60709 AC026634.1-201ENST00000634369 198 ntBASIC2.1□□□□□ -2.07
ACTBP60709 AL590396.4-201ENST00000636779 956 ntBASIC2.1□□□□□ -2.07
ACTBP60709 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
ACTBP60709 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.1□□□□□ -2.07
ACTBP60709 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
ACTBP60709 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
ACTBP60709 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
ACTBP60709 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.09□□□□□ -2.07
ACTBP60709 SNORA80A-201ENST00000363922 136 ntBASIC2.09□□□□□ -2.07
ACTBP60709 AL035405.1-201ENST00000400795 710 ntBASIC2.09□□□□□ -2.07
ACTBP60709 RNU2-15P-201ENST00000410692 191 ntBASIC2.09□□□□□ -2.07
ACTBP60709 RNU6-575P-201ENST00000411326 105 ntBASIC2.09□□□□□ -2.07
ACTBP60709 AC092634.6-201ENST00000418558 192 ntBASIC2.09□□□□□ -2.07
ACTBP60709 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.09□□□□□ -2.07
ACTBP60709 GTF2IP20-201ENST00000431663 360 ntBASIC2.09□□□□□ -2.07
ACTBP60709 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.09□□□□□ -2.07
ACTBP60709 AL512844.2-201ENST00000433990 593 ntBASIC2.09□□□□□ -2.07
ACTBP60709 AC234064.1-201ENST00000436312 247 ntBASIC2.09□□□□□ -2.07
ACTBP60709 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.09□□□□□ -2.07
ACTBP60709 RPL7P55-201ENST00000450522 746 ntBASIC2.09□□□□□ -2.07
ACTBP60709 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.09□□□□□ -2.07
ACTBP60709 MTND2P30-201ENST00000456663 382 ntBASIC2.09□□□□□ -2.07
ACTBP60709 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.09□□□□□ -2.07
ACTBP60709 AC108734.3-201ENST00000481241 1165 ntBASIC2.09□□□□□ -2.07
ACTBP60709 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.09□□□□□ -2.07
ACTBP60709 AC079804.2-201ENST00000490376 200 ntBASIC2.09□□□□□ -2.07
ACTBP60709 AC023141.11-201ENST00000508864 202 ntBASIC2.09□□□□□ -2.07
ACTBP60709 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.09□□□□□ -2.07
ACTBP60709 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.09□□□□□ -2.07
ACTBP60709 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.09□□□□□ -2.07
ACTBP60709 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.09□□□□□ -2.07
ACTBP60709 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms