Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AF117829.1-206ENST00000621883 3802 ntBASIC3.29□□□□□ -1.88
CDH13P55290 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH13P55290 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CDH13P55290 RNU4-91P-201ENST00000364778 135 ntBASIC3.29□□□□□ -1.88
CDH13P55290 RNU1-64P-201ENST00000365443 163 ntBASIC3.29□□□□□ -1.88
CDH13P55290 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH13P55290 MIR514A1-201ENST00000385133 98 ntBASIC3.29□□□□□ -1.88
CDH13P55290 RNU6-278P-201ENST00000390945 109 ntBASIC3.29□□□□□ -1.88
CDH13P55290 AL021407.1-201ENST00000404531 386 ntBASIC3.29□□□□□ -1.88
CDH13P55290 AL445189.1-201ENST00000405722 338 ntBASIC3.29□□□□□ -1.88
CDH13P55290 RN7SKP159-201ENST00000410657 292 ntBASIC3.29□□□□□ -1.88
CDH13P55290 RNA5SP107-201ENST00000411358 122 ntBASIC3.29□□□□□ -1.88
CDH13P55290 CYCSP19-201ENST00000411715 316 ntBASIC3.29□□□□□ -1.88
CDH13P55290 NPM1P11-201ENST00000417106 855 ntBASIC3.29□□□□□ -1.88
CDH13P55290 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH13P55290 RPL7L1P10-201ENST00000427790 463 ntBASIC3.29□□□□□ -1.88
CDH13P55290 CYCSP4-201ENST00000429682 331 ntBASIC3.29□□□□□ -1.88
CDH13P55290 AC244035.1-201ENST00000430042 390 ntBASIC3.29□□□□□ -1.88
CDH13P55290 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.29□□□□□ -1.88
CDH13P55290 AC098826.1-201ENST00000433943 471 ntBASIC3.29□□□□□ -1.88
CDH13P55290 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH13P55290 Z83846.1-201ENST00000446798 265 ntBASIC3.29□□□□□ -1.88
CDH13P55290 AC125238.1-201ENST00000448842 249 ntBASIC3.29□□□□□ -1.88
CDH13P55290 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH13P55290 AF131216.2-201ENST00000512316 564 ntBASIC3.29□□□□□ -1.88
CDH13P55290 PHBP14-201ENST00000512887 367 ntBASIC3.29□□□□□ -1.88
CDH13P55290 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.29□□□□□ -1.88
CDH13P55290 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH13P55290 IGHV3-76-201ENST00000522465 295 ntBASIC3.29□□□□□ -1.88
CDH13P55290 DEFB108A-201ENST00000530110 222 ntBASIC3.29□□□□□ -1.88
CDH13P55290 AC103843.2-201ENST00000530523 682 ntBASIC3.29□□□□□ -1.88
CDH13P55290 AC022878.1-201ENST00000530684 149 ntBASIC3.29□□□□□ -1.88
CDH13P55290 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH13P55290 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH13P55290 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDH13P55290 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH13P55290 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH13P55290 AC093227.2-201ENST00000589357 285 ntBASIC3.29□□□□□ -1.88
CDH13P55290 AC090970.3-201ENST00000612566 866 ntBASIC3.29□□□□□ -1.88
CDH13P55290 AC092140.2-201ENST00000618027 521 ntBASIC3.29□□□□□ -1.88
CDH13P55290 AC009878.1-201ENST00000621819 340 ntBASIC3.29□□□□□ -1.88
CDH13P55290 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDH13P55290 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDH13P55290 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH13P55290 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH13P55290 SNORA5A-201ENST00000384111 134 ntBASIC3.28□□□□□ -1.88
CDH13P55290 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CDH13P55290 SNORD17-201ENST00000390930 237 ntBASIC3.28□□□□□ -1.88
CDH13P55290 RAB9AP3-201ENST00000412737 573 ntBASIC3.28□□□□□ -1.88
CDH13P55290 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH13P55290 SYF2P2-201ENST00000417620 583 ntBASIC3.28□□□□□ -1.88
CDH13P55290 BX842559.1-201ENST00000419615 532 ntBASIC3.28□□□□□ -1.88
CDH13P55290 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH13P55290 AL590383.1-201ENST00000428602 75 ntBASIC3.28□□□□□ -1.88
CDH13P55290 USP12PX-201ENST00000432383 1057 ntBASIC3.28□□□□□ -1.88
CDH13P55290 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH13P55290 TIMM9P1-201ENST00000436122 256 ntBASIC3.28□□□□□ -1.88
CDH13P55290 AC129850.1-201ENST00000436203 508 ntBASIC3.28□□□□□ -1.88
CDH13P55290 NDUFB4P6-201ENST00000436819 366 ntBASIC3.28□□□□□ -1.88
CDH13P55290 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH13P55290 HMGB3P11-201ENST00000440127 604 ntBASIC3.28□□□□□ -1.88
CDH13P55290 AC092641.1-201ENST00000440229 772 ntBASIC3.28□□□□□ -1.88
CDH13P55290 AC005094.1-201ENST00000440420 368 ntBASIC3.28□□□□□ -1.88
CDH13P55290 COX6CP2-201ENST00000444980 225 ntBASIC3.28□□□□□ -1.88
CDH13P55290 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH13P55290 RAB9AP1-201ENST00000449393 573 ntBASIC3.28□□□□□ -1.88
CDH13P55290 USP9YP12-201ENST00000450481 570 ntBASIC3.28□□□□□ -1.88
CDH13P55290 AL359385.1-201ENST00000456509 365 ntBASIC3.28□□□□□ -1.88
CDH13P55290 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH13P55290 RPS20P20-201ENST00000460498 340 ntBASIC3.28□□□□□ -1.88
CDH13P55290 RPS27AP1-201ENST00000475545 471 ntBASIC3.28□□□□□ -1.88
CDH13P55290 RPL31P60-201ENST00000478450 367 ntBASIC3.28□□□□□ -1.88
CDH13P55290 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH13P55290 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH13P55290 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH13P55290 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.28□□□□□ -1.88
CDH13P55290 RNU6-840P-201ENST00000517275 65 ntBASIC3.28□□□□□ -1.88
CDH13P55290 AC022616.6-201ENST00000520479 119 ntBASIC3.28□□□□□ -1.88
CDH13P55290 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.28□□□□□ -1.88
CDH13P55290 AC093331.1-201ENST00000521474 169 ntBASIC3.28□□□□□ -1.88
CDH13P55290 AC022690.1-201ENST00000526681 550 ntBASIC3.28□□□□□ -1.88
CDH13P55290 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.28□□□□□ -1.88
CDH13P55290 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH13P55290 AC123904.2-201ENST00000548059 300 ntBASIC3.28□□□□□ -1.88
CDH13P55290 AL355836.1-201ENST00000555951 870 ntBASIC3.28□□□□□ -1.88
CDH13P55290 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH13P55290 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH13P55290 AC106785.1-201ENST00000565935 262 ntBASIC3.28□□□□□ -1.88
CDH13P55290 MIR4474-201ENST00000579189 78 ntBASIC3.28□□□□□ -1.88
CDH13P55290 MIR3146-201ENST00000580367 79 ntBASIC3.28□□□□□ -1.88
CDH13P55290 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.28□□□□□ -1.88
CDH13P55290 AL031985.2-201ENST00000600955 480 ntBASIC3.28□□□□□ -1.88
CDH13P55290 KC877982.1-201ENST00000602313 470 ntBASIC3.28□□□□□ -1.88
CDH13P55290 Z94722.1-201ENST00000604328 474 ntBASIC3.28□□□□□ -1.88
CDH13P55290 AC121334.2-201ENST00000605387 271 ntBASIC3.28□□□□□ -1.88
CDH13P55290 MIR7851-201ENST00000610611 160 ntBASIC3.28□□□□□ -1.88
CDH13P55290 AC245517.5-201ENST00000611529 162 ntBASIC3.28□□□□□ -1.88
CDH13P55290 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH13P55290 AC090132.2-201ENST00000615881 347 ntBASIC3.28□□□□□ -1.88
CDH13P55290 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms