Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.7□□□□□ -1.82
NR1H2P55055 MIR3158-1-201ENST00000583596 81 ntBASIC3.7□□□□□ -1.82
NR1H2P55055 HMGN1P30-201ENST00000589286 268 ntBASIC3.7□□□□□ -1.82
NR1H2P55055 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.7□□□□□ -1.82
NR1H2P55055 AC078795.2-201ENST00000602835 1252 ntBASIC3.7□□□□□ -1.82
NR1H2P55055 AL354984.3-201ENST00000604803 325 ntBASIC3.7□□□□□ -1.82
NR1H2P55055 AC008962.1-201ENST00000605729 304 ntBASIC3.7□□□□□ -1.82
NR1H2P55055 BX664608.1-201ENST00000610519 487 ntBASIC3.7□□□□□ -1.82
NR1H2P55055 MIR6867-201ENST00000610636 67 ntBASIC3.7□□□□□ -1.82
NR1H2P55055 AC008498.1-201ENST00000613012 531 ntBASIC3.7□□□□□ -1.82
NR1H2P55055 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.7□□□□□ -1.82
NR1H2P55055 AP001506.1-201ENST00000615444 211 ntBASIC3.7□□□□□ -1.82
NR1H2P55055 uc_338.12-201ENST00000616344 181 ntBASIC3.7□□□□□ -1.82
NR1H2P55055 AC099842.1-201ENST00000619919 596 ntBASIC3.7□□□□□ -1.82
NR1H2P55055 AC091905.1-201ENST00000624400 311 ntBASIC3.7□□□□□ -1.82
NR1H2P55055 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.7□□□□□ -1.82
NR1H2P55055 AC084035.1-201ENST00000634543 607 ntBASIC3.7□□□□□ -1.82
NR1H2P55055 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
NR1H2P55055 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.7□□□□□ -1.82
NR1H2P55055 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.7□□□□□ -1.82
NR1H2P55055 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
NR1H2P55055 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NR1H2P55055 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
NR1H2P55055 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NR1H2P55055 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
NR1H2P55055 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NR1H2P55055 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.69□□□□□ -1.82
NR1H2P55055 MIR591-201ENST00000385290 95 ntBASIC3.69□□□□□ -1.82
NR1H2P55055 RNU6-328P-201ENST00000390887 106 ntBASIC3.69□□□□□ -1.82
NR1H2P55055 RNA5SP107-201ENST00000411358 122 ntBASIC3.69□□□□□ -1.82
NR1H2P55055 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.69□□□□□ -1.82
NR1H2P55055 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.69□□□□□ -1.82
NR1H2P55055 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.69□□□□□ -1.82
NR1H2P55055 AC137499.1-201ENST00000427602 88 ntBASIC3.69□□□□□ -1.82
NR1H2P55055 AC006946.1-201ENST00000429106 328 ntBASIC3.69□□□□□ -1.82
NR1H2P55055 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.69□□□□□ -1.82
NR1H2P55055 AC005094.1-201ENST00000440420 368 ntBASIC3.69□□□□□ -1.82
NR1H2P55055 MTND6P13-201ENST00000443510 523 ntBASIC3.69□□□□□ -1.82
NR1H2P55055 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.69□□□□□ -1.82
NR1H2P55055 AL590664.1-201ENST00000448065 339 ntBASIC3.69□□□□□ -1.82
NR1H2P55055 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.69□□□□□ -1.82
NR1H2P55055 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.69□□□□□ -1.82
NR1H2P55055 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.69□□□□□ -1.82
NR1H2P55055 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.69□□□□□ -1.82
NR1H2P55055 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
NR1H2P55055 RNU6-405P-201ENST00000516637 110 ntBASIC3.69□□□□□ -1.82
NR1H2P55055 AC011979.2-201ENST00000527568 352 ntBASIC3.69□□□□□ -1.82
NR1H2P55055 AP003181.2-201ENST00000528941 181 ntBASIC3.69□□□□□ -1.82
NR1H2P55055 AP003122.4-201ENST00000530980 758 ntBASIC3.69□□□□□ -1.82
NR1H2P55055 AC022880.1-201ENST00000534017 973 ntBASIC3.69□□□□□ -1.82
NR1H2P55055 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.69□□□□□ -1.82
NR1H2P55055 AC123904.3-201ENST00000547218 814 ntBASIC3.69□□□□□ -1.82
NR1H2P55055 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.69□□□□□ -1.82
NR1H2P55055 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.69□□□□□ -1.82
NR1H2P55055 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.69□□□□□ -1.82
NR1H2P55055 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.69□□□□□ -1.82
NR1H2P55055 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.69□□□□□ -1.82
NR1H2P55055 AC098614.4-201ENST00000607601 462 ntBASIC3.69□□□□□ -1.82
NR1H2P55055 Z99129.1-201ENST00000612510 255 ntBASIC3.69□□□□□ -1.82
NR1H2P55055 AL138880.2-201ENST00000616214 239 ntBASIC3.69□□□□□ -1.82
NR1H2P55055 XIST_intron.1-201ENST00000619444 68 ntBASIC3.69□□□□□ -1.82
NR1H2P55055 AL139089.1-201ENST00000620372 975 ntBASIC3.69□□□□□ -1.82
NR1H2P55055 PLCE1P1-201ENST00000622094 305 ntBASIC3.69□□□□□ -1.82
NR1H2P55055 AL392088.2-201ENST00000637607 285 ntBASIC3.69□□□□□ -1.82
NR1H2P55055 MIR7153-201ENST00000637758 57 ntBASIC3.69□□□□□ -1.82
NR1H2P55055 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
NR1H2P55055 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NR1H2P55055 OR4G2P-202ENST00000641004 1759 ntBASIC3.68□□□□□ -1.82
NR1H2P55055 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NR1H2P55055 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NR1H2P55055 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
NR1H2P55055 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.68□□□□□ -1.82
NR1H2P55055 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.68□□□□□ -1.82
NR1H2P55055 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
NR1H2P55055 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NR1H2P55055 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NR1H2P55055 RNA5SP130-201ENST00000364431 114 ntBASIC3.68□□□□□ -1.82
NR1H2P55055 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NR1H2P55055 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
NR1H2P55055 Y_RNA.517-201ENST00000384551 106 ntBASIC3.68□□□□□ -1.82
NR1H2P55055 RN7SKP33-201ENST00000410942 340 ntBASIC3.68□□□□□ -1.82
NR1H2P55055 CYCSP19-201ENST00000411715 316 ntBASIC3.68□□□□□ -1.82
NR1H2P55055 AL513331.1-201ENST00000411908 397 ntBASIC3.68□□□□□ -1.82
NR1H2P55055 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.68□□□□□ -1.82
NR1H2P55055 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.68□□□□□ -1.82
NR1H2P55055 ZNF885P-201ENST00000420174 1098 ntBASIC3.68□□□□□ -1.82
NR1H2P55055 RPL31P12-201ENST00000422587 358 ntBASIC3.68□□□□□ -1.82
NR1H2P55055 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.68□□□□□ -1.82
NR1H2P55055 TAAR7P-201ENST00000436141 242 ntBASIC3.68□□□□□ -1.82
NR1H2P55055 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.68□□□□□ -1.82
NR1H2P55055 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.68□□□□□ -1.82
NR1H2P55055 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.68□□□□□ -1.82
NR1H2P55055 AL359385.1-201ENST00000456509 365 ntBASIC3.68□□□□□ -1.82
NR1H2P55055 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.68□□□□□ -1.82
NR1H2P55055 RPL30P14-201ENST00000482744 348 ntBASIC3.68□□□□□ -1.82
NR1H2P55055 MTND1P3-201ENST00000484956 952 ntBASIC3.68□□□□□ -1.82
NR1H2P55055 RPL7P47-201ENST00000497299 556 ntBASIC3.68□□□□□ -1.82
NR1H2P55055 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.68□□□□□ -1.82
NR1H2P55055 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.68□□□□□ -1.82
NR1H2P55055 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms