Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 AC016691.1-201ENST00000441321 413 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 RANP8-201ENST00000444720 713 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 CBWD4P-201ENST00000445695 655 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 MRPL50P4-201ENST00000446432 475 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 PABPC1P3-201ENST00000469174 459 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 RN7SL132P-201ENST00000478131 296 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 RN7SL323P-201ENST00000494712 295 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 NIPA2P2-201ENST00000496376 1083 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.13□□□□□ -1.75
CACNA2D1P54289 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.13□□□□□ -1.75
CACNA2D1P54289 RN7SKP82-201ENST00000516786 223 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 AC105029.1-201ENST00000520250 669 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.13□□□□□ -1.75
CACNA2D1P54289 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.13□□□□□ -1.75
CACNA2D1P54289 AC022616.3-201ENST00000523940 148 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 OR5B19P-201ENST00000531766 928 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.13□□□□□ -1.75
CACNA2D1P54289 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.13□□□□□ -1.75
CACNA2D1P54289 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
CACNA2D1P54289 AL161713.1-201ENST00000555538 145 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.13□□□□□ -1.75
CACNA2D1P54289 AL355375.2-201ENST00000574825 175 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.13□□□□□ -1.75
CACNA2D1P54289 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.13□□□□□ -1.75
CACNA2D1P54289 AC005255.1-201ENST00000593748 216 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 YWHAQP7-201ENST00000603536 658 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 Y_RNA.812-201ENST00000610788 101 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 DISC2.1-201ENST00000612827 205 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CACNA2D1P54289 Y_RNA.784-201ENST00000613803 101 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 Y_RNA.787-201ENST00000616522 101 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 Y_RNA.780-201ENST00000617336 101 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 Y_RNA.801-201ENST00000619005 101 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.13□□□□□ -1.75
CACNA2D1P54289 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.13□□□□□ -1.75
CACNA2D1P54289 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CACNA2D1P54289 MIR6715B-201ENST00000637172 77 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CACNA2D1P54289 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CACNA2D1P54289 AL122126.1-201ENST00000546905 1318 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 SAGE2P-201ENST00000420011 2126 ntBASIC4.13□□□□□ -1.75
CACNA2D1P54289 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.13□□□□□ -1.75
CACNA2D1P54289 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CACNA2D1P54289 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
CACNA2D1P54289 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CACNA2D1P54289 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
CACNA2D1P54289 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CACNA2D1P54289 RNA5SP124-201ENST00000362739 110 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 Y_RNA.67-201ENST00000362870 100 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 RNU6-1120P-201ENST00000362988 108 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 Y_RNA.157-201ENST00000363638 102 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 Y_RNA.326-201ENST00000365176 113 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CACNA2D1P54289 AL591416.1-201ENST00000404015 867 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 AL162578.1-201ENST00000406202 378 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 OR4F13P-201ENST00000428478 931 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.12□□□□□ -1.75
CACNA2D1P54289 RPL36AP53-201ENST00000432891 316 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.12□□□□□ -1.75
CACNA2D1P54289 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.12□□□□□ -1.75
CACNA2D1P54289 AC119618.1-201ENST00000434191 222 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 RPL23AP74-201ENST00000437246 471 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.12□□□□□ -1.75
CACNA2D1P54289 HSPE1P28-201ENST00000443139 211 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 MTND4P19-201ENST00000446659 478 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.12□□□□□ -1.75
CACNA2D1P54289 AC233279.1-201ENST00000455300 423 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.12□□□□□ -1.75
CACNA2D1P54289 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.12□□□□□ -1.75
CACNA2D1P54289 AC093853.1-201ENST00000515689 483 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 SNORA40.12-201ENST00000516329 111 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 RNU1-45P-201ENST00000517191 141 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 AC022690.1-201ENST00000526681 550 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 PTP4A1P6-201ENST00000531034 478 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.12□□□□□ -1.75
CACNA2D1P54289 LSM6P2-201ENST00000552208 177 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 MIR1254-2-201ENST00000579553 63 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.12□□□□□ -1.75
CACNA2D1P54289 AC067852.4-201ENST00000590314 478 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.12□□□□□ -1.75
CACNA2D1P54289 AC243960.4-201ENST00000600532 288 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 AL355472.4-201ENST00000610233 626 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 AC004825.2-201ENST00000616634 455 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.12□□□□□ -1.75
CACNA2D1P54289 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CACNA2D1P54289 XPOTP1-201ENST00000443317 2398 ntBASIC4.12□□□□□ -1.75
CACNA2D1P54289 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CACNA2D1P54289 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
CACNA2D1P54289 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CACNA2D1P54289 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CACNA2D1P54289 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CACNA2D1P54289 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CACNA2D1P54289 BDP1P-201ENST00000582658 1990 ntBASIC4.11□□□□□ -1.75
CACNA2D1P54289 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CACNA2D1P54289 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.11□□□□□ -1.75
CACNA2D1P54289 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CACNA2D1P54289 Y_RNA.166-201ENST00000363730 102 ntBASIC4.11□□□□□ -1.75
CACNA2D1P54289 RNU6-1293P-201ENST00000384077 107 ntBASIC4.11□□□□□ -1.75
CACNA2D1P54289 U1.1-201ENST00000384101 164 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms