Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 OFD1P18Y-201ENST00000420889 959 ntBASIC2.01□□□□□ -2.09
NUP98P52948 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC2.01□□□□□ -2.09
NUP98P52948 AC132942.1-201ENST00000486753 483 ntBASIC2.01□□□□□ -2.09
NUP98P52948 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.01□□□□□ -2.09
NUP98P52948 AC026241.1-201ENST00000517873 2142 ntBASIC2.01□□□□□ -2.09
NUP98P52948 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.01□□□□□ -2.09
NUP98P52948 HSPE1P20-201ENST00000538133 289 ntBASIC2.01□□□□□ -2.09
NUP98P52948 COX6CP3-201ENST00000580869 223 ntBASIC2.01□□□□□ -2.09
NUP98P52948 OR4G1P-201ENST00000588632 938 ntBASIC2.01□□□□□ -2.09
NUP98P52948 OR1S1-201ENST00000624470 978 ntBASIC2.01□□□□□ -2.09
NUP98P52948 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
NUP98P52948 RNU6-263P-201ENST00000363811 107 ntBASIC2.01□□□□□ -2.09
NUP98P52948 RNA5SP27-201ENST00000363839 119 ntBASIC2.01□□□□□ -2.09
NUP98P52948 BX510359.4-201ENST00000423750 193 ntBASIC2.01□□□□□ -2.09
NUP98P52948 MTCYBP45-201ENST00000435243 565 ntBASIC2.01□□□□□ -2.09
NUP98P52948 RPL7P29-201ENST00000437151 728 ntBASIC2.01□□□□□ -2.09
NUP98P52948 MTCYBP34-201ENST00000439552 670 ntBASIC2.01□□□□□ -2.09
NUP98P52948 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.01□□□□□ -2.09
NUP98P52948 RPS26P21-201ENST00000475397 348 ntBASIC2.01□□□□□ -2.09
NUP98P52948 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.01□□□□□ -2.09
NUP98P52948 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.01□□□□□ -2.09
NUP98P52948 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.01□□□□□ -2.09
NUP98P52948 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.01□□□□□ -2.09
NUP98P52948 RMST_6.1-201ENST00000611980 203 ntBASIC2.01□□□□□ -2.09
NUP98P52948 AC018755.4-201ENST00000619715 454 ntBASIC2.01□□□□□ -2.09
NUP98P52948 AC095031.1-201ENST00000623685 672 ntBASIC2.01□□□□□ -2.09
NUP98P52948 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.01□□□□□ -2.09
NUP98P52948 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2□□□□□ -2.09
NUP98P52948 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2□□□□□ -2.09
NUP98P52948 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2□□□□□ -2.09
NUP98P52948 AL606495.1-201ENST00000422100 813 ntBASIC2□□□□□ -2.09
NUP98P52948 RPS6P14-201ENST00000425165 719 ntBASIC2□□□□□ -2.09
NUP98P52948 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2□□□□□ -2.09
NUP98P52948 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2□□□□□ -2.09
NUP98P52948 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2□□□□□ -2.09
NUP98P52948 CIR1P1-201ENST00000524055 1133 ntBASIC2□□□□□ -2.09
NUP98P52948 OSBPL9P3-201ENST00000534523 595 ntBASIC2□□□□□ -2.09
NUP98P52948 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2□□□□□ -2.09
NUP98P52948 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2□□□□□ -2.09
NUP98P52948 MIR3618-201ENST00000580330 88 ntBASIC2□□□□□ -2.09
NUP98P52948 AC090740.1-201ENST00000623193 2262 ntBASIC1.99□□□□□ -2.09
NUP98P52948 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.99□□□□□ -2.09
NUP98P52948 LSM1P1-201ENST00000438629 273 ntBASIC1.99□□□□□ -2.09
NUP98P52948 Z73417.1-201ENST00000447373 778 ntBASIC1.99□□□□□ -2.09
NUP98P52948 snoU13.4-201ENST00000458916 104 ntBASIC1.99□□□□□ -2.09
NUP98P52948 AC108078.2-201ENST00000510750 236 ntBASIC1.99□□□□□ -2.09
NUP98P52948 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.99□□□□□ -2.09
NUP98P52948 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.99□□□□□ -2.09
NUP98P52948 AC016065.2-201ENST00000514530 444 ntBASIC1.99□□□□□ -2.09
NUP98P52948 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.99□□□□□ -2.09
NUP98P52948 C1DP5-201ENST00000525775 383 ntBASIC1.99□□□□□ -2.09
NUP98P52948 AC027104.1-201ENST00000563702 681 ntBASIC1.99□□□□□ -2.09
NUP98P52948 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.99□□□□□ -2.09
NUP98P52948 AC113368.1-201ENST00000603736 382 ntBASIC1.99□□□□□ -2.09
NUP98P52948 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
NUP98P52948 U8.1-201ENST00000362843 134 ntBASIC1.98□□□□□ -2.09
NUP98P52948 SNORD48-201ENST00000364953 64 ntBASIC1.98□□□□□ -2.09
NUP98P52948 RNA5SP38-201ENST00000410750 119 ntBASIC1.98□□□□□ -2.09
NUP98P52948 AC073264.1-201ENST00000411508 416 ntBASIC1.98□□□□□ -2.09
NUP98P52948 AC092447.6-201ENST00000414578 210 ntBASIC1.98□□□□□ -2.09
NUP98P52948 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.98□□□□□ -2.09
NUP98P52948 AC097499.1-201ENST00000444277 208 ntBASIC1.98□□□□□ -2.09
NUP98P52948 AC092685.1-201ENST00000447960 1243 ntBASIC1.98□□□□□ -2.09
NUP98P52948 ERHP1-201ENST00000523006 310 ntBASIC1.98□□□□□ -2.09
NUP98P52948 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.98□□□□□ -2.09
NUP98P52948 AP003385.6-201ENST00000531603 374 ntBASIC1.98□□□□□ -2.09
NUP98P52948 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.98□□□□□ -2.09
NUP98P52948 NOP56P3-201ENST00000549457 385 ntBASIC1.98□□□□□ -2.09
NUP98P52948 AC010546.1-201ENST00000569391 485 ntBASIC1.98□□□□□ -2.09
NUP98P52948 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.98□□□□□ -2.09
NUP98P52948 DUXAP4-201ENST00000603046 613 ntBASIC1.98□□□□□ -2.09
NUP98P52948 XIAPP1-201ENST00000603162 600 ntBASIC1.98□□□□□ -2.09
NUP98P52948 AC009570.1-201ENST00000609599 745 ntBASIC1.98□□□□□ -2.09
NUP98P52948 AL121594.5-201ENST00000631724 573 ntBASIC1.98□□□□□ -2.09
NUP98P52948 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.98□□□□□ -2.09
NUP98P52948 WWP1P1-201ENST00000466609 2769 ntBASIC1.98□□□□□ -2.09
NUP98P52948 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.98□□□□□ -2.09
NUP98P52948 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
NUP98P52948 RNU6-60P-201ENST00000364792 103 ntBASIC1.98□□□□□ -2.09
NUP98P52948 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.98□□□□□ -2.09
NUP98P52948 RPS3AP9-201ENST00000417027 792 ntBASIC1.98□□□□□ -2.09
NUP98P52948 RPL7P30-201ENST00000420888 709 ntBASIC1.98□□□□□ -2.09
NUP98P52948 Z96811.1-201ENST00000445880 108 ntBASIC1.98□□□□□ -2.09
NUP98P52948 RPL21P131-201ENST00000497298 483 ntBASIC1.98□□□□□ -2.09
NUP98P52948 AIG1P1-201ENST00000503376 148 ntBASIC1.98□□□□□ -2.09
NUP98P52948 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.98□□□□□ -2.09
NUP98P52948 AC084851.1-201ENST00000529105 249 ntBASIC1.98□□□□□ -2.09
NUP98P52948 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.98□□□□□ -2.09
NUP98P52948 AC092470.1-201ENST00000546187 132 ntBASIC1.98□□□□□ -2.09
NUP98P52948 AC126177.3-201ENST00000551839 688 ntBASIC1.98□□□□□ -2.09
NUP98P52948 AC015720.1-201ENST00000565251 277 ntBASIC1.98□□□□□ -2.09
NUP98P52948 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.98□□□□□ -2.09
NUP98P52948 AC008739.2-201ENST00000597006 317 ntBASIC1.98□□□□□ -2.09
NUP98P52948 AC106791.2-201ENST00000604680 391 ntBASIC1.98□□□□□ -2.09
NUP98P52948 AL158801.5-201ENST00000623123 465 ntBASIC1.98□□□□□ -2.09
NUP98P52948 AC110079.1-202ENST00000635213 138 ntBASIC1.98□□□□□ -2.09
NUP98P52948 HSPE1P11-201ENST00000339579 310 ntBASIC1.97□□□□□ -2.09
NUP98P52948 SNORA1.3-201ENST00000384676 136 ntBASIC1.97□□□□□ -2.09
NUP98P52948 RNU2-68P-201ENST00000410878 191 ntBASIC1.97□□□□□ -2.09
NUP98P52948 AC004965.1-201ENST00000413033 213 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms