Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 SNORA48.2-201ENST00000390926 124 ntBASIC3.66□□□□□ -1.82
CLCN3P51790 MTND1P21-201ENST00000412991 285 ntBASIC3.66□□□□□ -1.82
CLCN3P51790 AC126124.2-201ENST00000413542 321 ntBASIC3.66□□□□□ -1.82
CLCN3P51790 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.66□□□□□ -1.82
CLCN3P51790 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.66□□□□□ -1.82
CLCN3P51790 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.66□□□□□ -1.82
CLCN3P51790 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.66□□□□□ -1.82
CLCN3P51790 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.66□□□□□ -1.82
CLCN3P51790 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.66□□□□□ -1.82
CLCN3P51790 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.66□□□□□ -1.82
CLCN3P51790 AC008264.1-201ENST00000447612 367 ntBASIC3.66□□□□□ -1.82
CLCN3P51790 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.66□□□□□ -1.82
CLCN3P51790 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.66□□□□□ -1.82
CLCN3P51790 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.66□□□□□ -1.82
CLCN3P51790 AC096751.1-202ENST00000502691 1067 ntBASIC3.66□□□□□ -1.82
CLCN3P51790 RNU6-405P-201ENST00000516637 110 ntBASIC3.66□□□□□ -1.82
CLCN3P51790 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.66□□□□□ -1.82
CLCN3P51790 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLCN3P51790 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.66□□□□□ -1.82
CLCN3P51790 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.66□□□□□ -1.82
CLCN3P51790 AC135001.1-201ENST00000544546 283 ntBASIC3.66□□□□□ -1.82
CLCN3P51790 AC027807.1-201ENST00000559921 996 ntBASIC3.66□□□□□ -1.82
CLCN3P51790 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.66□□□□□ -1.82
CLCN3P51790 TPMTP1-201ENST00000592307 737 ntBASIC3.66□□□□□ -1.82
CLCN3P51790 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.66□□□□□ -1.82
CLCN3P51790 AC005000.2-201ENST00000605468 310 ntBASIC3.66□□□□□ -1.82
CLCN3P51790 AC091965.4-201ENST00000607691 587 ntBASIC3.66□□□□□ -1.82
CLCN3P51790 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.66□□□□□ -1.82
CLCN3P51790 MIR6130-201ENST00000619419 109 ntBASIC3.66□□□□□ -1.82
CLCN3P51790 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
CLCN3P51790 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.66□□□□□ -1.82
CLCN3P51790 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLCN3P51790 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.66□□□□□ -1.82
CLCN3P51790 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLCN3P51790 AC010733.2-201ENST00000589496 5702 ntBASIC3.65□□□□□ -1.82
CLCN3P51790 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
CLCN3P51790 AC011460.1-201ENST00000636268 1834 ntBASIC3.65□□□□□ -1.82
CLCN3P51790 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CLCN3P51790 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CLCN3P51790 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.65□□□□□ -1.82
CLCN3P51790 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.65□□□□□ -1.82
CLCN3P51790 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CLCN3P51790 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CLCN3P51790 RNU6-348P-201ENST00000384386 107 ntBASIC3.65□□□□□ -1.83
CLCN3P51790 Y_RNA.517-201ENST00000384551 106 ntBASIC3.65□□□□□ -1.83
CLCN3P51790 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLCN3P51790 AL359704.1-201ENST00000411586 781 ntBASIC3.65□□□□□ -1.83
CLCN3P51790 Z92545.1-201ENST00000411782 234 ntBASIC3.65□□□□□ -1.83
CLCN3P51790 UBE2V1P10-201ENST00000414685 269 ntBASIC3.65□□□□□ -1.83
CLCN3P51790 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.65□□□□□ -1.83
CLCN3P51790 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.65□□□□□ -1.83
CLCN3P51790 TOMM22P1-201ENST00000418578 312 ntBASIC3.65□□□□□ -1.83
CLCN3P51790 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.65□□□□□ -1.83
CLCN3P51790 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.65□□□□□ -1.83
CLCN3P51790 AC006028.1-201ENST00000438379 402 ntBASIC3.65□□□□□ -1.83
CLCN3P51790 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.65□□□□□ -1.83
CLCN3P51790 SSXP1-201ENST00000453640 473 ntBASIC3.65□□□□□ -1.83
CLCN3P51790 SNRPGP5-201ENST00000456003 220 ntBASIC3.65□□□□□ -1.83
CLCN3P51790 AC010285.1-201ENST00000470580 392 ntBASIC3.65□□□□□ -1.83
CLCN3P51790 AP000797.1-201ENST00000478870 387 ntBASIC3.65□□□□□ -1.83
CLCN3P51790 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.65□□□□□ -1.83
CLCN3P51790 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.65□□□□□ -1.83
CLCN3P51790 AC110794.1-201ENST00000505816 425 ntBASIC3.65□□□□□ -1.83
CLCN3P51790 RPL37P25-201ENST00000507308 276 ntBASIC3.65□□□□□ -1.83
CLCN3P51790 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.65□□□□□ -1.83
CLCN3P51790 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLCN3P51790 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.65□□□□□ -1.83
CLCN3P51790 AC009101.1-201ENST00000568135 242 ntBASIC3.65□□□□□ -1.83
CLCN3P51790 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.65□□□□□ -1.83
CLCN3P51790 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.65□□□□□ -1.83
CLCN3P51790 AC034268.2-201ENST00000571784 482 ntBASIC3.65□□□□□ -1.83
CLCN3P51790 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLCN3P51790 AL139286.2-201ENST00000606838 396 ntBASIC3.65□□□□□ -1.83
CLCN3P51790 AC099842.1-201ENST00000619919 596 ntBASIC3.65□□□□□ -1.83
CLCN3P51790 AL360181.4-201ENST00000621752 134 ntBASIC3.65□□□□□ -1.83
CLCN3P51790 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.65□□□□□ -1.83
CLCN3P51790 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.65□□□□□ -1.83
CLCN3P51790 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLCN3P51790 MTND5P33-201ENST00000571250 1450 ntBASIC3.65□□□□□ -1.83
CLCN3P51790 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.65□□□□□ -1.83
CLCN3P51790 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLCN3P51790 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLCN3P51790 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
CLCN3P51790 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CLCN3P51790 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLCN3P51790 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.64□□□□□ -1.83
CLCN3P51790 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.64□□□□□ -1.83
CLCN3P51790 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CLCN3P51790 RNU6-1074P-201ENST00000383995 104 ntBASIC3.64□□□□□ -1.83
CLCN3P51790 SNORD115.1-201ENST00000391109 76 ntBASIC3.64□□□□□ -1.83
CLCN3P51790 RNU2-66P-201ENST00000410650 161 ntBASIC3.64□□□□□ -1.83
CLCN3P51790 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.64□□□□□ -1.83
CLCN3P51790 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.64□□□□□ -1.83
CLCN3P51790 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.64□□□□□ -1.83
CLCN3P51790 AC002075.2-201ENST00000425207 252 ntBASIC3.64□□□□□ -1.83
CLCN3P51790 DUTP6-201ENST00000425573 462 ntBASIC3.64□□□□□ -1.83
CLCN3P51790 AC091390.3-201ENST00000426478 338 ntBASIC3.64□□□□□ -1.83
CLCN3P51790 AC010975.2-201ENST00000427781 588 ntBASIC3.64□□□□□ -1.83
CLCN3P51790 GDI2P2-201ENST00000445131 608 ntBASIC3.64□□□□□ -1.83
CLCN3P51790 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms