Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC010928.3-201ENST00000587712 541 ntBASIC3.25□□□□□ -1.89
NEDD4P46934 AL390208.1-201ENST00000605885 644 ntBASIC3.25□□□□□ -1.89
NEDD4P46934 AC072039.2-201ENST00000608883 439 ntBASIC3.25□□□□□ -1.89
NEDD4P46934 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.25□□□□□ -1.89
NEDD4P46934 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.25□□□□□ -1.89
NEDD4P46934 AL031667.3-201ENST00000620124 655 ntBASIC3.25□□□□□ -1.89
NEDD4P46934 AC078883.4-201ENST00000623218 367 ntBASIC3.25□□□□□ -1.89
NEDD4P46934 AC079248.2-201ENST00000623779 326 ntBASIC3.25□□□□□ -1.89
NEDD4P46934 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NEDD4P46934 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NEDD4P46934 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.25□□□□□ -1.89
NEDD4P46934 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NEDD4P46934 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NEDD4P46934 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NEDD4P46934 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
NEDD4P46934 RNU6-1249P-201ENST00000363237 111 ntBASIC3.24□□□□□ -1.89
NEDD4P46934 RNU6-335P-201ENST00000364563 113 ntBASIC3.24□□□□□ -1.89
NEDD4P46934 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.24□□□□□ -1.89
NEDD4P46934 RNU6-723P-201ENST00000383973 107 ntBASIC3.24□□□□□ -1.89
NEDD4P46934 RN7SKP123-201ENST00000410732 291 ntBASIC3.24□□□□□ -1.89
NEDD4P46934 RPL23AP39-201ENST00000415533 405 ntBASIC3.24□□□□□ -1.89
NEDD4P46934 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.24□□□□□ -1.89
NEDD4P46934 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.24□□□□□ -1.89
NEDD4P46934 AC011233.1-201ENST00000422812 283 ntBASIC3.24□□□□□ -1.89
NEDD4P46934 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.24□□□□□ -1.89
NEDD4P46934 AC112220.1-201ENST00000434628 355 ntBASIC3.24□□□□□ -1.89
NEDD4P46934 UBE2FP3-201ENST00000436366 524 ntBASIC3.24□□□□□ -1.89
NEDD4P46934 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.24□□□□□ -1.89
NEDD4P46934 MTCO1P27-201ENST00000448269 226 ntBASIC3.24□□□□□ -1.89
NEDD4P46934 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.24□□□□□ -1.89
NEDD4P46934 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.24□□□□□ -1.89
NEDD4P46934 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NEDD4P46934 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.24□□□□□ -1.89
NEDD4P46934 AC117522.3-201ENST00000507974 584 ntBASIC3.24□□□□□ -1.89
NEDD4P46934 AC093809.1-201ENST00000509155 340 ntBASIC3.24□□□□□ -1.89
NEDD4P46934 MTCYBP43-201ENST00000513621 740 ntBASIC3.24□□□□□ -1.89
NEDD4P46934 AC119751.5-201ENST00000514077 770 ntBASIC3.24□□□□□ -1.89
NEDD4P46934 AC093677.1-201ENST00000514414 678 ntBASIC3.24□□□□□ -1.89
NEDD4P46934 OR6C7P-201ENST00000547875 934 ntBASIC3.24□□□□□ -1.89
NEDD4P46934 SETP7-201ENST00000552169 453 ntBASIC3.24□□□□□ -1.89
NEDD4P46934 AL353997.4-201ENST00000586196 166 ntBASIC3.24□□□□□ -1.89
NEDD4P46934 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.24□□□□□ -1.89
NEDD4P46934 AC090186.1-201ENST00000605991 572 ntBASIC3.24□□□□□ -1.89
NEDD4P46934 AC004223.4-201ENST00000612426 332 ntBASIC3.24□□□□□ -1.89
NEDD4P46934 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.24□□□□□ -1.89
NEDD4P46934 AC005183.1-201ENST00000603687 1979 ntBASIC3.24□□□□□ -1.89
NEDD4P46934 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.24□□□□□ -1.89
NEDD4P46934 AL161781.1-201ENST00000354277 403 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 Y_RNA.302-201ENST00000364997 102 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.23□□□□□ -1.89
NEDD4P46934 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
NEDD4P46934 AL356057.3-201ENST00000402607 340 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 MIR320C1-201ENST00000408566 88 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NEDD4P46934 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.23□□□□□ -1.89
NEDD4P46934 MTND2P18-201ENST00000419962 1030 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.23□□□□□ -1.89
NEDD4P46934 MTND1P20-201ENST00000430341 950 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.23□□□□□ -1.89
NEDD4P46934 UBE2D3P1-201ENST00000436669 444 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.23□□□□□ -1.89
NEDD4P46934 BX322784.1-201ENST00000455793 1077 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 RPL30P6-201ENST00000475925 342 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 AC072039.1-201ENST00000477611 581 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 RN7SL297P-201ENST00000483161 293 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 RPF2P2-201ENST00000504693 896 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.23□□□□□ -1.89
NEDD4P46934 LTV1P1-201ENST00000510683 1237 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 RNA5SP356-201ENST00000515972 94 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 RNU1-103P-201ENST00000516502 125 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 RNU6-232P-201ENST00000517144 64 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 AC087276.1-201ENST00000529659 480 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NEDD4P46934 AC007834.2-201ENST00000536310 343 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 AL133271.1-201ENST00000538229 291 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 AC024224.1-201ENST00000538284 609 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 OSBPL9P5-201ENST00000542581 171 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.23□□□□□ -1.89
NEDD4P46934 OR4H12P-201ENST00000556269 907 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.23□□□□□ -1.89
NEDD4P46934 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.23□□□□□ -1.89
NEDD4P46934 SNRPGP15-201ENST00000600149 222 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 BBIP1P1-201ENST00000602999 279 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 DUXAP11-201ENST00000603858 526 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 AC128687.1-201ENST00000605304 619 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 AC007619.2-201ENST00000605743 379 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 AC122133.1-201ENST00000613964 233 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
NEDD4P46934 AC007671.2-201ENST00000637344 619 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 AC099063.3-201ENST00000642066 185 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NEDD4P46934 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NEDD4P46934 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
NEDD4P46934 AL157700.1-201ENST00000561973 1432 ntBASIC3.23□□□□□ -1.89
NEDD4P46934 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NEDD4P46934 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
NEDD4P46934 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NEDD4P46934 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NEDD4P46934 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NEDD4P46934 AL049780.3-201ENST00000624612 1583 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms