Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NKX2-1P43699 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NKX2-1P43699 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NKX2-1P43699 Y_RNA.41-201ENST00000362646 102 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
NKX2-1P43699 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
NKX2-1P43699 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NKX2-1P43699 U1.1-201ENST00000384101 164 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 RPL7P60-201ENST00000397636 735 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 MRPL42P2-201ENST00000403169 426 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 CCNG1P1-201ENST00000406783 885 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 U3.42-201ENST00000408746 214 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NKX2-1P43699 RNU6-648P-201ENST00000410190 107 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 AF274854.1-201ENST00000413236 615 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 UBE2FP1-201ENST00000416536 447 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 SPA17P1-201ENST00000416656 452 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 RIOK3P1-201ENST00000418778 1528 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 AC008850.1-201ENST00000427546 362 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 AC137499.1-201ENST00000427602 88 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.06□□□□□ -1.92
NKX2-1P43699 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.06□□□□□ -1.92
NKX2-1P43699 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.06□□□□□ -1.92
NKX2-1P43699 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.06□□□□□ -1.92
NKX2-1P43699 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.06□□□□□ -1.92
NKX2-1P43699 AL136097.1-201ENST00000456945 913 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.06□□□□□ -1.92
NKX2-1P43699 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
NKX2-1P43699 MTND1P3-201ENST00000484956 952 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.06□□□□□ -1.92
NKX2-1P43699 HMGB1P29-201ENST00000505659 499 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 AC108078.1-201ENST00000508073 725 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 RAC1P2-201ENST00000511164 579 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.06□□□□□ -1.92
NKX2-1P43699 GMPSP1-201ENST00000514075 579 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
NKX2-1P43699 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.06□□□□□ -1.92
NKX2-1P43699 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
NKX2-1P43699 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.06□□□□□ -1.92
NKX2-1P43699 YPEL5P3-201ENST00000547227 352 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.06□□□□□ -1.92
NKX2-1P43699 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
NKX2-1P43699 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.06□□□□□ -1.92
NKX2-1P43699 TGIF1P1-201ENST00000558095 802 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 AC006960.3-201ENST00000561845 705 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NKX2-1P43699 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.06□□□□□ -1.92
NKX2-1P43699 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.06□□□□□ -1.92
NKX2-1P43699 AC137800.2-201ENST00000574375 120 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 MIR3913-1-201ENST00000577744 102 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 MIR4700-201ENST00000578311 74 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.06□□□□□ -1.92
NKX2-1P43699 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.06□□□□□ -1.92
NKX2-1P43699 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.06□□□□□ -1.92
NKX2-1P43699 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.06□□□□□ -1.92
NKX2-1P43699 MIR8058-201ENST00000615737 89 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.06□□□□□ -1.92
NKX2-1P43699 AC068792.1-201ENST00000621354 417 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 MIR7153-201ENST00000637758 57 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 AC099654.12-201ENST00000639868 649 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NKX2-1P43699 AC073073.2-201ENST00000609827 2578 ntBASIC3.06□□□□□ -1.92
NKX2-1P43699 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
NKX2-1P43699 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
NKX2-1P43699 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.05□□□□□ -1.92
NKX2-1P43699 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.05□□□□□ -1.92
NKX2-1P43699 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
NKX2-1P43699 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NKX2-1P43699 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NKX2-1P43699 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NKX2-1P43699 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
NKX2-1P43699 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
NKX2-1P43699 RNU6-1284P-201ENST00000363701 100 ntBASIC3.05□□□□□ -1.92
NKX2-1P43699 MIR514A1-201ENST00000385133 98 ntBASIC3.05□□□□□ -1.92
NKX2-1P43699 MTHFD2P2-201ENST00000407725 247 ntBASIC3.05□□□□□ -1.92
NKX2-1P43699 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.05□□□□□ -1.92
NKX2-1P43699 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.05□□□□□ -1.92
NKX2-1P43699 HMGB3P20-201ENST00000417997 600 ntBASIC3.05□□□□□ -1.92
NKX2-1P43699 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.05□□□□□ -1.92
NKX2-1P43699 UBE2D3P2-201ENST00000424409 445 ntBASIC3.05□□□□□ -1.92
NKX2-1P43699 RPL7L1P10-201ENST00000427790 463 ntBASIC3.05□□□□□ -1.92
NKX2-1P43699 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.05□□□□□ -1.92
NKX2-1P43699 AL158071.1-201ENST00000430315 461 ntBASIC3.05□□□□□ -1.92
NKX2-1P43699 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.05□□□□□ -1.92
NKX2-1P43699 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.05□□□□□ -1.92
NKX2-1P43699 SETP5-201ENST00000437270 562 ntBASIC3.05□□□□□ -1.92
NKX2-1P43699 AC005094.1-201ENST00000440420 368 ntBASIC3.05□□□□□ -1.92
NKX2-1P43699 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.05□□□□□ -1.92
NKX2-1P43699 AC016696.1-201ENST00000446949 318 ntBASIC3.05□□□□□ -1.92
NKX2-1P43699 AC132479.1-201ENST00000449160 144 ntBASIC3.05□□□□□ -1.92
NKX2-1P43699 AC093392.2-201ENST00000450682 337 ntBASIC3.05□□□□□ -1.92
NKX2-1P43699 AC006539.3-201ENST00000454258 129 ntBASIC3.05□□□□□ -1.92
NKX2-1P43699 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.05□□□□□ -1.92
NKX2-1P43699 RPS20P20-201ENST00000460498 340 ntBASIC3.05□□□□□ -1.92
NKX2-1P43699 AC008481.1-201ENST00000463278 396 ntBASIC3.05□□□□□ -1.92
NKX2-1P43699 RPS23P7-201ENST00000466210 444 ntBASIC3.05□□□□□ -1.92
NKX2-1P43699 AL049714.1-201ENST00000466686 347 ntBASIC3.05□□□□□ -1.92
NKX2-1P43699 RPL7L1P8-201ENST00000469911 741 ntBASIC3.05□□□□□ -1.92
NKX2-1P43699 AC023598.1-201ENST00000472521 361 ntBASIC3.05□□□□□ -1.92
NKX2-1P43699 RPS27AP1-201ENST00000475545 471 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms