Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HNF4AP41235 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.33□□□□□ -1.88
HNF4AP41235 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.33□□□□□ -1.88
HNF4AP41235 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HNF4AP41235 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HNF4AP41235 RNU1-75P-201ENST00000347264 129 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 Y_RNA.18-201ENST00000362461 102 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 RNU6-97P-201ENST00000363387 104 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 RNU4-24P-201ENST00000364565 139 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 RNU6-660P-201ENST00000364566 109 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 RNU6-343P-201ENST00000364709 104 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 Y_RNA.302-201ENST00000364997 102 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 AP002088.1-201ENST00000382740 395 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HNF4AP41235 RPL7L1P10-201ENST00000427790 463 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.33□□□□□ -1.88
HNF4AP41235 AC091862.1-201ENST00000438016 1100 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 AP000936.2-201ENST00000447151 681 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 KATNBL1P6-201ENST00000453433 915 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 RPS4XP2-201ENST00000458402 793 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 AC092798.1-201ENST00000458542 409 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 RNU6-420P-201ENST00000458780 107 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 AC091564.1-201ENST00000464563 479 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 RN7SL442P-201ENST00000473804 320 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 AC104563.1-201ENST00000476147 376 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.33□□□□□ -1.88
HNF4AP41235 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.33□□□□□ -1.88
HNF4AP41235 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.33□□□□□ -1.88
HNF4AP41235 Y_RNA.655-201ENST00000515919 96 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 RNU6-150P-201ENST00000516237 95 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 AC107934.2-201ENST00000518653 310 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.33□□□□□ -1.88
HNF4AP41235 AC106038.2-201ENST00000520706 568 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.33□□□□□ -1.88
HNF4AP41235 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HNF4AP41235 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.33□□□□□ -1.88
HNF4AP41235 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HNF4AP41235 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.33□□□□□ -1.88
HNF4AP41235 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.33□□□□□ -1.88
HNF4AP41235 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
HNF4AP41235 MTCYBP22-201ENST00000603788 447 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 AC245389.1-201ENST00000605141 529 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 AC090132.2-201ENST00000615881 347 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 AC243312.2-201ENST00000623340 601 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 AC079228.1-201ENST00000624774 1049 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 AL390237.1-201ENST00000404226 1415 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 FAM35CP-201ENST00000554755 2470 ntBASIC3.33□□□□□ -1.88
HNF4AP41235 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HNF4AP41235 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.33□□□□□ -1.88
HNF4AP41235 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.33□□□□□ -1.88
HNF4AP41235 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.32□□□□□ -1.88
HNF4AP41235 AC017071.1-201ENST00000564407 2204 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
HNF4AP41235 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HNF4AP41235 RPL21P132-201ENST00000331267 462 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 RNU6-433P-201ENST00000363216 104 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HNF4AP41235 MIR514A1-201ENST00000385133 98 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 RN7SKP27-201ENST00000410684 333 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.32□□□□□ -1.88
HNF4AP41235 RPS7P13-201ENST00000413955 498 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 ATG3P1-201ENST00000419507 911 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.32□□□□□ -1.88
HNF4AP41235 RPL23AP82-202ENST00000427528 469 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.32□□□□□ -1.88
HNF4AP41235 BX679664.1-201ENST00000434429 253 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.32□□□□□ -1.88
HNF4AP41235 LARP1BP3-201ENST00000437229 869 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.32□□□□□ -1.88
HNF4AP41235 MTCO2P7-201ENST00000446518 666 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 RPL21P23-201ENST00000446654 460 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 EEF1E1P1-201ENST00000446998 430 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 AC008264.1-201ENST00000447612 367 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.32□□□□□ -1.88
HNF4AP41235 ZNF114P1-201ENST00000453500 292 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.32□□□□□ -1.88
HNF4AP41235 RPS27P29-201ENST00000463110 252 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 CENPBD1P1-201ENST00000464061 469 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 RPL30P9-201ENST00000465586 330 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 AC021205.2-201ENST00000480069 347 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 AL049874.1-201ENST00000489560 388 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.32□□□□□ -1.88
HNF4AP41235 MTCYBP43-201ENST00000513621 740 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.32□□□□□ -1.88
HNF4AP41235 SCARNA15.2-201ENST00000516409 127 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
HNF4AP41235 AC060788.1-201ENST00000521318 469 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.32□□□□□ -1.88
HNF4AP41235 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
HNF4AP41235 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.32□□□□□ -1.88
HNF4AP41235 HIGD1AP1-201ENST00000550979 275 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.32□□□□□ -1.88
HNF4AP41235 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.32□□□□□ -1.88
HNF4AP41235 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.32□□□□□ -1.88
HNF4AP41235 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.32□□□□□ -1.88
HNF4AP41235 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.32□□□□□ -1.88
HNF4AP41235 AC119751.7-201ENST00000600494 245 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 AL596327.1-201ENST00000603629 213 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 AC004832.5-201ENST00000608677 401 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms