Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 Y_RNA.395-201ENST00000383945 109 ntBASIC4.81□□□□□ -1.64
CCNFP41002 AL645927.1-201ENST00000396783 406 ntBASIC4.81□□□□□ -1.64
CCNFP41002 AL133270.1-201ENST00000402635 279 ntBASIC4.81□□□□□ -1.64
CCNFP41002 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.81□□□□□ -1.64
CCNFP41002 AC113618.1-201ENST00000416747 285 ntBASIC4.81□□□□□ -1.64
CCNFP41002 PMCHL1-202ENST00000423102 261 ntBASIC4.81□□□□□ -1.64
CCNFP41002 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNFP41002 AF228730.2-201ENST00000438784 848 ntBASIC4.81□□□□□ -1.64
CCNFP41002 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNFP41002 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNFP41002 MTND1P17-201ENST00000448961 204 ntBASIC4.81□□□□□ -1.64
CCNFP41002 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNFP41002 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.81□□□□□ -1.64
CCNFP41002 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CCNFP41002 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.81□□□□□ -1.64
CCNFP41002 SMURF2P1-201ENST00000514992 481 ntBASIC4.81□□□□□ -1.64
CCNFP41002 RNU6-1046P-201ENST00000516538 107 ntBASIC4.81□□□□□ -1.64
CCNFP41002 RNU6-1332P-201ENST00000516666 104 ntBASIC4.81□□□□□ -1.64
CCNFP41002 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.81□□□□□ -1.64
CCNFP41002 RNU6-677P-201ENST00000516914 101 ntBASIC4.81□□□□□ -1.64
CCNFP41002 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.81□□□□□ -1.64
CCNFP41002 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNFP41002 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNFP41002 FKBP1BP1-201ENST00000553366 325 ntBASIC4.81□□□□□ -1.64
CCNFP41002 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.81□□□□□ -1.64
CCNFP41002 RPL21P7-201ENST00000557463 483 ntBASIC4.81□□□□□ -1.64
CCNFP41002 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNFP41002 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNFP41002 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNFP41002 AC069061.3-201ENST00000582254 823 ntBASIC4.81□□□□□ -1.64
CCNFP41002 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNFP41002 Z98200.1-201ENST00000607298 470 ntBASIC4.81□□□□□ -1.64
CCNFP41002 AL359547.2-201ENST00000615810 418 ntBASIC4.81□□□□□ -1.64
CCNFP41002 ATP5A1P2-202ENST00000616464 443 ntBASIC4.81□□□□□ -1.64
CCNFP41002 AC010378.1-201ENST00000619270 362 ntBASIC4.81□□□□□ -1.64
CCNFP41002 RMST_9.1-201ENST00000619945 193 ntBASIC4.81□□□□□ -1.64
CCNFP41002 CR381572.2-201ENST00000624852 397 ntBASIC4.81□□□□□ -1.64
CCNFP41002 MTND5P42-201ENST00000637720 498 ntBASIC4.81□□□□□ -1.64
CCNFP41002 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CCNFP41002 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.81□□□□□ -1.64
CCNFP41002 AL137003.2-201ENST00000606924 2538 ntBASIC4.81□□□□□ -1.64
CCNFP41002 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCNFP41002 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCNFP41002 AL592182.3-201ENST00000642132 3304 ntBASIC4.8□□□□□ -1.64
CCNFP41002 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCNFP41002 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.8□□□□□ -1.64
CCNFP41002 INTS6P1-201ENST00000504674 2530 ntBASIC4.8□□□□□ -1.64
CCNFP41002 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CCNFP41002 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.8□□□□□ -1.64
CCNFP41002 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCNFP41002 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.8□□□□□ -1.64
CCNFP41002 RN7SKP104-201ENST00000362605 328 ntBASIC4.8□□□□□ -1.64
CCNFP41002 RNU6-562P-201ENST00000362731 107 ntBASIC4.8□□□□□ -1.64
CCNFP41002 RNU6-434P-201ENST00000384376 107 ntBASIC4.8□□□□□ -1.64
CCNFP41002 MIR921-201ENST00000401133 56 ntBASIC4.8□□□□□ -1.64
CCNFP41002 AL121834.1-202ENST00000404494 277 ntBASIC4.8□□□□□ -1.64
CCNFP41002 Z74021.1-201ENST00000423610 407 ntBASIC4.8□□□□□ -1.64
CCNFP41002 SNAP23P1-201ENST00000433229 246 ntBASIC4.8□□□□□ -1.64
CCNFP41002 AC090774.1-201ENST00000435925 246 ntBASIC4.8□□□□□ -1.64
CCNFP41002 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.8□□□□□ -1.64
CCNFP41002 RN7SL329P-201ENST00000467740 299 ntBASIC4.8□□□□□ -1.64
CCNFP41002 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.8□□□□□ -1.64
CCNFP41002 RN7SL817P-201ENST00000480777 288 ntBASIC4.8□□□□□ -1.64
CCNFP41002 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.8□□□□□ -1.64
CCNFP41002 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCNFP41002 RN7SKP60-201ENST00000516985 239 ntBASIC4.8□□□□□ -1.64
CCNFP41002 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.8□□□□□ -1.64
CCNFP41002 RANP9-201ENST00000519957 271 ntBASIC4.8□□□□□ -1.64
CCNFP41002 RNU6-323P-201ENST00000521915 107 ntBASIC4.8□□□□□ -1.64
CCNFP41002 AP000676.2-201ENST00000529711 301 ntBASIC4.8□□□□□ -1.64
CCNFP41002 AC090115.3-201ENST00000553218 849 ntBASIC4.8□□□□□ -1.64
CCNFP41002 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.8□□□□□ -1.64
CCNFP41002 AC015912.2-201ENST00000571053 181 ntBASIC4.8□□□□□ -1.64
CCNFP41002 MIR4646-201ENST00000580775 63 ntBASIC4.8□□□□□ -1.64
CCNFP41002 AC100830.2-201ENST00000581636 240 ntBASIC4.8□□□□□ -1.64
CCNFP41002 MIR5692C1-201ENST00000585309 91 ntBASIC4.8□□□□□ -1.64
CCNFP41002 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.8□□□□□ -1.64
CCNFP41002 AC104763.2-201ENST00000604179 382 ntBASIC4.8□□□□□ -1.64
CCNFP41002 AL138726.1-201ENST00000614873 333 ntBASIC4.8□□□□□ -1.64
CCNFP41002 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.8□□□□□ -1.64
CCNFP41002 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCNFP41002 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CCNFP41002 MTND4P1-201ENST00000457501 1466 ntBASIC4.8□□□□□ -1.64
CCNFP41002 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCNFP41002 AC099654.2-201ENST00000433031 1980 ntBASIC4.8□□□□□ -1.64
CCNFP41002 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.8□□□□□ -1.64
CCNFP41002 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCNFP41002 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.79□□□□□ -1.64
CCNFP41002 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CCNFP41002 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCNFP41002 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.79□□□□□ -1.64
CCNFP41002 RN7SKP95-201ENST00000362860 303 ntBASIC4.79□□□□□ -1.64
CCNFP41002 MIR195-201ENST00000385194 87 ntBASIC4.79□□□□□ -1.64
CCNFP41002 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCNFP41002 AL139397.2-201ENST00000404529 772 ntBASIC4.79□□□□□ -1.64
CCNFP41002 HSPE1P8-201ENST00000406997 288 ntBASIC4.79□□□□□ -1.64
CCNFP41002 RPLP0P7-201ENST00000416050 667 ntBASIC4.79□□□□□ -1.64
CCNFP41002 PPP1R11P2-201ENST00000423543 382 ntBASIC4.79□□□□□ -1.64
CCNFP41002 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.79□□□□□ -1.64
CCNFP41002 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms