Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 MTAPP1-201ENST00000489154 819 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.28□□□□□ -1.88
HLA-DOBP13765 AC135721.1-201ENST00000497954 479 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 ARL4AP2-201ENST00000507378 601 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 AC026402.1-201ENST00000513642 170 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 AC026801.2-201ENST00000515352 425 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DOBP13765 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DOBP13765 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.28□□□□□ -1.88
HLA-DOBP13765 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DOBP13765 TOMM20P2-201ENST00000540082 421 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 AL512310.1-201ENST00000548639 172 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 AL121603.1-201ENST00000553815 142 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 AC092325.1-201ENST00000566449 554 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DOBP13765 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.28□□□□□ -1.88
HLA-DOBP13765 KLKP1-201ENST00000595979 403 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 AC012507.3-201ENST00000603556 477 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 AC007363.1-201ENST00000604736 620 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DOBP13765 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HLA-DOBP13765 AC006338.1-201ENST00000618453 749 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
HLA-DOBP13765 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DOBP13765 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DOBP13765 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DOBP13765 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
HLA-DOBP13765 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DOBP13765 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DOBP13765 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DOBP13765 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DOBP13765 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DOBP13765 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DOBP13765 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DOBP13765 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DOBP13765 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DOBP13765 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DOBP13765 RNU6-1085P-201ENST00000363576 107 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 U3.11-201ENST00000364476 212 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 RNU6-1283P-201ENST00000365314 105 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
HLA-DOBP13765 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DOBP13765 SNORD3H-201ENST00000384486 214 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 RNU6-456P-201ENST00000384493 107 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 MIR135A2-201ENST00000384854 100 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 MIR3074-201ENST00000384885 81 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HLA-DOBP13765 AL109755.1-201ENST00000401791 649 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 AL391417.1-201ENST00000404100 426 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DOBP13765 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DOBP13765 FTH1P6-201ENST00000430768 320 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 GPR143P-201ENST00000434155 205 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 AL596276.1-201ENST00000434465 418 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 AC079781.2-201ENST00000446424 169 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DOBP13765 RPL23AP20-201ENST00000447965 421 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DOBP13765 AC022364.2-201ENST00000457963 554 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 AL049714.1-201ENST00000466686 347 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DOBP13765 ARL2BPP6-201ENST00000512757 439 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DOBP13765 AC090572.1-201ENST00000519251 160 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 AC008489.1-201ENST00000524271 483 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 OR5AQ1P-201ENST00000527596 927 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 DEFB108D-201ENST00000527787 222 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 AL157687.1-201ENST00000554853 619 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 AL121576.1-201ENST00000556055 276 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 SNORD84-203ENST00000584275 78 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 AC105224.1-201ENST00000587055 421 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DOBP13765 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DOBP13765 AC007014.2-201ENST00000615581 479 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 AL731566.2-201ENST00000618971 317 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 AC009161.2-201ENST00000624626 138 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 AC019226.1-201ENST00000625666 515 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 MIR3688-2-201ENST00000636963 87 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 AP000553.6-201ENST00000641242 118 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DOBP13765 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
HLA-DOBP13765 CR848007.1-201ENST00000442354 1699 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 DDX10P1-201ENST00000448545 1933 ntBASIC3.27□□□□□ -1.89
HLA-DOBP13765 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DOBP13765 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 PNPT1P2-201ENST00000456768 2050 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DOBP13765 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DOBP13765 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DOBP13765 RN7SKP44-201ENST00000363602 316 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 RNY4P14-201ENST00000363656 96 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 Y_RNA.402-201ENST00000383972 102 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 Y_RNA.481-201ENST00000384373 102 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 SNORA57.1-201ENST00000391227 145 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms