Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
FREM3P0C091 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.66□□□□□ -2.14
FREM3P0C091 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.66□□□□□ -2.14
FREM3P0C091 HSPE1P20-201ENST00000538133 289 ntBASIC1.66□□□□□ -2.14
FREM3P0C091 AC084033.1-201ENST00000550830 633 ntBASIC1.66□□□□□ -2.14
FREM3P0C091 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.66□□□□□ -2.14
FREM3P0C091 MIR4419B-201ENST00000577260 68 ntBASIC1.66□□□□□ -2.14
FREM3P0C091 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.66□□□□□ -2.14
FREM3P0C091 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.66□□□□□ -2.14
FREM3P0C091 VN1R74P-201ENST00000613259 503 ntBASIC1.66□□□□□ -2.14
FREM3P0C091 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.66□□□□□ -2.14
FREM3P0C091 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
FREM3P0C091 AC111188.2-201ENST00000529697 1387 ntBASIC1.65□□□□□ -2.14
FREM3P0C091 KPNA2P1-201ENST00000458289 1591 ntBASIC1.65□□□□□ -2.15
FREM3P0C091 Y_RNA.4-201ENST00000362333 112 ntBASIC1.65□□□□□ -2.15
FREM3P0C091 SET-203ENST00000372688 801 ntTSL 2 BASIC1.65□□□□□ -2.15
FREM3P0C091 AL356320.2-201ENST00000417263 507 ntBASIC1.65□□□□□ -2.15
FREM3P0C091 EIF1AXP1-201ENST00000419267 435 ntBASIC1.65□□□□□ -2.15
FREM3P0C091 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.65□□□□□ -2.15
FREM3P0C091 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
FREM3P0C091 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.65□□□□□ -2.15
FREM3P0C091 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.65□□□□□ -2.15
FREM3P0C091 AL049838.1-201ENST00000563647 981 ntBASIC1.65□□□□□ -2.15
FREM3P0C091 AC027104.1-201ENST00000563702 681 ntBASIC1.65□□□□□ -2.15
FREM3P0C091 MIR4255-201ENST00000579351 72 ntBASIC1.65□□□□□ -2.15
FREM3P0C091 CBX3P2-202ENST00000583365 535 ntBASIC1.65□□□□□ -2.15
FREM3P0C091 AL022099.1-201ENST00000604551 712 ntBASIC1.65□□□□□ -2.15
FREM3P0C091 DPRXP5-201ENST00000604662 539 ntBASIC1.65□□□□□ -2.15
FREM3P0C091 AL590099.1-201ENST00000615276 138 ntBASIC1.65□□□□□ -2.15
FREM3P0C091 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.65□□□□□ -2.15
FREM3P0C091 AC068880.5-201ENST00000624331 290 ntBASIC1.65□□□□□ -2.15
FREM3P0C091 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
FREM3P0C091 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.65□□□□□ -2.15
FREM3P0C091 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
FREM3P0C091 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
FREM3P0C091 RNA5SP393-201ENST00000363423 117 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 RNU6-1226P-201ENST00000384317 107 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 FO393413.1-201ENST00000402892 195 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 RNU2-20P-201ENST00000410425 191 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 RNU6-1140P-201ENST00000410517 106 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 RNU4-78P-201ENST00000410940 126 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 RNA5SP489-201ENST00000410986 109 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 AC010385.1-201ENST00000412374 256 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.64□□□□□ -2.15
FREM3P0C091 UBE2D3P2-201ENST00000424409 445 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 RPL7P54-201ENST00000438336 674 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.64□□□□□ -2.15
FREM3P0C091 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.64□□□□□ -2.15
FREM3P0C091 AC234775.1-201ENST00000454247 670 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 SETP11-201ENST00000473027 690 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 MTND3P24-201ENST00000506306 329 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 MTCO3P44-201ENST00000510977 541 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 PRELID3BP4-201ENST00000515476 571 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
FREM3P0C091 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.64□□□□□ -2.15
FREM3P0C091 MIR5694-201ENST00000581190 76 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.64□□□□□ -2.15
FREM3P0C091 SNHG22-203ENST00000617833 660 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
FREM3P0C091 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
FREM3P0C091 AL137003.2-201ENST00000606924 2538 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 AC008669.1-201ENST00000565823 2178 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.64□□□□□ -2.15
FREM3P0C091 RNA5SP258-201ENST00000362750 119 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 RNU6-374P-201ENST00000364146 108 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 RNU6-1151P-201ENST00000384684 107 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 TAS2R15P-201ENST00000390674 928 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.64□□□□□ -2.15
FREM3P0C091 AL645568.3-201ENST00000433683 316 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.64□□□□□ -2.15
FREM3P0C091 LSM1P1-201ENST00000438629 273 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 RPS20P24-201ENST00000457473 361 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 RPL23AP70-201ENST00000483361 460 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 NAMPTP2-201ENST00000505629 1115 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.64□□□□□ -2.15
FREM3P0C091 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.64□□□□□ -2.15
FREM3P0C091 AC090666.1-201ENST00000578241 445 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 AL137246.1-201ENST00000607072 977 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 AC004775.1-201ENST00000607389 753 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 AC093838.1-201ENST00000613014 469 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 MIR7111-201ENST00000619751 72 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 AC087359.1-201ENST00000508335 1740 ntBASIC1.64□□□□□ -2.15
FREM3P0C091 Y_RNA.164-201ENST00000363709 102 ntBASIC1.63□□□□□ -2.15
FREM3P0C091 SSXP10-201ENST00000402595 565 ntBASIC1.63□□□□□ -2.15
FREM3P0C091 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.63□□□□□ -2.15
FREM3P0C091 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.63□□□□□ -2.15
FREM3P0C091 UBE2V1P6-201ENST00000430840 422 ntBASIC1.63□□□□□ -2.15
FREM3P0C091 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.63□□□□□ -2.15
FREM3P0C091 RNF2P1-201ENST00000442955 1010 ntBASIC1.63□□□□□ -2.15
FREM3P0C091 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.63□□□□□ -2.15
FREM3P0C091 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.63□□□□□ -2.15
FREM3P0C091 AC092798.1-201ENST00000458542 409 ntBASIC1.63□□□□□ -2.15
FREM3P0C091 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.63□□□□□ -2.15
FREM3P0C091 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.63□□□□□ -2.15
FREM3P0C091 MTCO1P47-201ENST00000523889 1271 ntBASIC1.63□□□□□ -2.15
FREM3P0C091 MIR5089-201ENST00000580047 84 ntBASIC1.63□□□□□ -2.15
FREM3P0C091 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.63□□□□□ -2.15
FREM3P0C091 AL161734.1-201ENST00000609720 557 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms