Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 MIR26A1-201ENST00000362205 77 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 AL139098.1-201ENST00000407291 389 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 RNA5SP80-201ENST00000410475 111 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 RNU6-712P-201ENST00000410558 100 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 AC109780.2-201ENST00000413467 845 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 AL161449.1-201ENST00000414531 1199 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 RPL21P32-201ENST00000419877 477 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.75□□□□□ -1.97
HOXC4P09017 AC005345.1-201ENST00000431868 217 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 AC093155.1-201ENST00000440164 826 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 UBE2D3P4-201ENST00000441973 436 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 MTND2P19-201ENST00000449129 1012 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 RPS27AP8-201ENST00000452665 445 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 RPL21P134-201ENST00000453468 483 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 ANKRD26P4-201ENST00000455755 950 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 PABPC1P3-201ENST00000469174 459 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.75□□□□□ -1.97
HOXC4P09017 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.75□□□□□ -1.97
HOXC4P09017 GAPDHP39-201ENST00000481866 979 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.75□□□□□ -1.97
HOXC4P09017 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.75□□□□□ -1.97
HOXC4P09017 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
HOXC4P09017 RNA5SP135-201ENST00000517019 125 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 AC079600.2-201ENST00000550076 130 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.75□□□□□ -1.97
HOXC4P09017 AL391156.1-201ENST00000554965 554 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 AC087465.1-201ENST00000560574 245 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.75□□□□□ -1.97
HOXC4P09017 AC006023.1-201ENST00000603944 259 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 AL031281.1-201ENST00000604049 488 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 AC121247.2-201ENST00000604776 136 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 OR2AS2P-201ENST00000606902 342 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 AC072039.2-201ENST00000608883 439 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 AC139792.2-201ENST00000624218 587 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.75□□□□□ -1.97
HOXC4P09017 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HOXC4P09017 AP003122.5-201ENST00000527668 3766 ntBASIC2.75□□□□□ -1.97
HOXC4P09017 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
HOXC4P09017 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.75□□□□□ -1.97
HOXC4P09017 SGO1P2-201ENST00000429458 1589 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 AL049780.3-201ENST00000624612 1583 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HOXC4P09017 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HOXC4P09017 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.74□□□□□ -1.97
HOXC4P09017 RNU6-560P-201ENST00000364007 108 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 SNORD82-201ENST00000365530 70 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.74□□□□□ -1.97
HOXC4P09017 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
HOXC4P09017 Y_RNA.500-201ENST00000384466 111 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 MIR217-201ENST00000384817 110 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.74□□□□□ -1.97
HOXC4P09017 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.74□□□□□ -1.97
HOXC4P09017 AC007435.1-201ENST00000421086 415 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 NUP35P1-201ENST00000422734 947 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 BX119904.4-201ENST00000424402 301 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.74□□□□□ -1.97
HOXC4P09017 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.74□□□□□ -1.97
HOXC4P09017 RABEPKP1-201ENST00000440529 1026 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 MTND3P1-201ENST00000441336 220 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 MTND2P4-201ENST00000445034 1004 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 RPL39P40-201ENST00000445481 146 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.74□□□□□ -1.97
HOXC4P09017 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.74□□□□□ -1.97
HOXC4P09017 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.74□□□□□ -1.97
HOXC4P09017 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.74□□□□□ -1.97
HOXC4P09017 MTND3P7-201ENST00000474435 343 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 HMGN2P13-201ENST00000476476 274 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HOXC4P09017 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 AC096751.1-202ENST00000502691 1067 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 AC117532.1-201ENST00000514638 323 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.74□□□□□ -1.97
HOXC4P09017 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HOXC4P09017 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.74□□□□□ -1.97
HOXC4P09017 AC018630.1-201ENST00000541376 925 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 ELOCP32-201ENST00000548625 324 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 AC055876.1-202ENST00000567053 138 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 MIR4672-201ENST00000583126 81 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.74□□□□□ -1.97
HOXC4P09017 VN1R90P-201ENST00000595717 726 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 AC106791.2-201ENST00000604680 391 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 AC131235.4-201ENST00000609288 620 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
HOXC4P09017 AC004696.1-201ENST00000614345 607 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 AL355810.1-201ENST00000614629 552 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 AC023158.2-201ENST00000614876 543 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 AC068831.7-201ENST00000616954 363 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 AL603755.1-201ENST00000619504 163 ntBASIC2.74□□□□□ -1.97
HOXC4P09017 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.74□□□□□ -1.97
HOXC4P09017 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.74□□□□□ -1.97
HOXC4P09017 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.74□□□□□ -1.97
HOXC4P09017 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HOXC4P09017 AC109315.1-201ENST00000584143 1347 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.73□□□□□ -1.97
HOXC4P09017 ARF4P3-201ENST00000397387 509 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 RPS3AP26-201ENST00000398259 784 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 AL024474.1-201ENST00000404655 591 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 AL365203.2-201ENST00000423444 196 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 USP9YP36-201ENST00000424581 829 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms