Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.2□□□□□ -1.9
VIMP08670 Z82195.2-201ENST00000612348 18351 ntBASIC3.2□□□□□ -1.9
VIMP08670 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VIMP08670 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VIMP08670 SNORA56-201ENST00000383966 129 ntBASIC3.19□□□□□ -1.9
VIMP08670 CCNG1P1-201ENST00000406783 885 ntBASIC3.19□□□□□ -1.9
VIMP08670 RPL23AP39-201ENST00000415533 405 ntBASIC3.19□□□□□ -1.9
VIMP08670 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.19□□□□□ -1.9
VIMP08670 AC005005.2-201ENST00000420779 380 ntBASIC3.19□□□□□ -1.9
VIMP08670 SAR1AP4-201ENST00000429225 591 ntBASIC3.19□□□□□ -1.9
VIMP08670 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.19□□□□□ -1.9
VIMP08670 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.19□□□□□ -1.9
VIMP08670 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.19□□□□□ -1.9
VIMP08670 LARP1BP3-201ENST00000437229 869 ntBASIC3.19□□□□□ -1.9
VIMP08670 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.19□□□□□ -1.9
VIMP08670 RPL39P40-201ENST00000445481 146 ntBASIC3.19□□□□□ -1.9
VIMP08670 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.19□□□□□ -1.9
VIMP08670 RPL32P34-201ENST00000486380 400 ntBASIC3.19□□□□□ -1.9
VIMP08670 AC021678.1-201ENST00000505195 936 ntBASIC3.19□□□□□ -1.9
VIMP08670 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.19□□□□□ -1.9
VIMP08670 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.19□□□□□ -1.9
VIMP08670 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.19□□□□□ -1.9
VIMP08670 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.19□□□□□ -1.9
VIMP08670 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.19□□□□□ -1.9
VIMP08670 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.19□□□□□ -1.9
VIMP08670 AC124947.2-202ENST00000552735 133 ntBASIC3.19□□□□□ -1.9
VIMP08670 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.19□□□□□ -1.9
VIMP08670 AL355836.1-201ENST00000555951 870 ntBASIC3.19□□□□□ -1.9
VIMP08670 MIR4307-201ENST00000582802 84 ntBASIC3.19□□□□□ -1.9
VIMP08670 TPMTP1-201ENST00000592307 737 ntBASIC3.19□□□□□ -1.9
VIMP08670 AL031985.2-201ENST00000600955 480 ntBASIC3.19□□□□□ -1.9
VIMP08670 DUXAP4-201ENST00000603046 613 ntBASIC3.19□□□□□ -1.9
VIMP08670 AC093838.1-201ENST00000613014 469 ntBASIC3.19□□□□□ -1.9
VIMP08670 AC004696.1-201ENST00000614345 607 ntBASIC3.19□□□□□ -1.9
VIMP08670 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.19□□□□□ -1.9
VIMP08670 AC091965.5-201ENST00000624785 342 ntBASIC3.19□□□□□ -1.9
VIMP08670 MIR6733-201ENST00000635723 61 ntBASIC3.19□□□□□ -1.9
VIMP08670 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VIMP08670 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VIMP08670 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.18□□□□□ -1.9
VIMP08670 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
VIMP08670 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
VIMP08670 MIR19A-201ENST00000384878 82 ntBASIC3.18□□□□□ -1.9
VIMP08670 TAS2R15P-201ENST00000390674 928 ntBASIC3.18□□□□□ -1.9
VIMP08670 RNA5SP252-201ENST00000391131 119 ntBASIC3.18□□□□□ -1.9
VIMP08670 RNU6ATAC-201ENST00000408749 126 ntBASIC3.18□□□□□ -1.9
VIMP08670 AC234781.2-201ENST00000426370 994 ntBASIC3.18□□□□□ -1.9
VIMP08670 AL590383.1-201ENST00000428602 75 ntBASIC3.18□□□□□ -1.9
VIMP08670 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.18□□□□□ -1.9
VIMP08670 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.18□□□□□ -1.9
VIMP08670 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.18□□□□□ -1.9
VIMP08670 RPS29P7-201ENST00000439662 171 ntBASIC3.18□□□□□ -1.9
VIMP08670 RPL23AP58-201ENST00000440453 469 ntBASIC3.18□□□□□ -1.9
VIMP08670 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.18□□□□□ -1.9
VIMP08670 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.18□□□□□ -1.9
VIMP08670 AC073387.1-201ENST00000453261 709 ntBASIC3.18□□□□□ -1.9
VIMP08670 AC004263.1-201ENST00000479327 332 ntBASIC3.18□□□□□ -1.9
VIMP08670 AP004217.1-201ENST00000480579 346 ntBASIC3.18□□□□□ -1.9
VIMP08670 PRELID3BP5-201ENST00000508612 460 ntBASIC3.18□□□□□ -1.9
VIMP08670 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.18□□□□□ -1.9
VIMP08670 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.18□□□□□ -1.9
VIMP08670 PAICSP4-201ENST00000517543 1253 ntBASIC3.18□□□□□ -1.9
VIMP08670 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.18□□□□□ -1.9
VIMP08670 HIGD1AP5-201ENST00000529959 259 ntBASIC3.18□□□□□ -1.9
VIMP08670 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.18□□□□□ -1.9
VIMP08670 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.18□□□□□ -1.9
VIMP08670 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.18□□□□□ -1.9
VIMP08670 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
VIMP08670 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.18□□□□□ -1.9
VIMP08670 AC112187.2-201ENST00000604345 283 ntBASIC3.18□□□□□ -1.9
VIMP08670 AC083809.1-201ENST00000615051 472 ntBASIC3.18□□□□□ -1.9
VIMP08670 AP000770.2-201ENST00000623694 100 ntBASIC3.18□□□□□ -1.9
VIMP08670 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
VIMP08670 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VIMP08670 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
VIMP08670 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
VIMP08670 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VIMP08670 RNU6-223P-201ENST00000362830 107 ntBASIC3.17□□□□□ -1.9
VIMP08670 AC068538.1-201ENST00000376856 336 ntBASIC3.17□□□□□ -1.9
VIMP08670 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
VIMP08670 MIR325-201ENST00000385260 98 ntBASIC3.17□□□□□ -1.9
VIMP08670 U8.14-201ENST00000390843 143 ntBASIC3.17□□□□□ -1.9
VIMP08670 AC025750.1-201ENST00000399891 379 ntBASIC3.17□□□□□ -1.9
VIMP08670 TXNP7-201ENST00000406296 293 ntBASIC3.17□□□□□ -1.9
VIMP08670 HMGN1P24-201ENST00000412282 298 ntBASIC3.17□□□□□ -1.9
VIMP08670 ATG3P1-201ENST00000419507 911 ntBASIC3.17□□□□□ -1.9
VIMP08670 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.17□□□□□ -1.9
VIMP08670 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.17□□□□□ -1.9
VIMP08670 MTCYBP39-201ENST00000437562 491 ntBASIC3.17□□□□□ -1.9
VIMP08670 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.17□□□□□ -1.9
VIMP08670 RPS12P18-201ENST00000442381 270 ntBASIC3.17□□□□□ -1.9
VIMP08670 GSTA11P-201ENST00000452866 669 ntBASIC3.17□□□□□ -1.9
VIMP08670 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.17□□□□□ -1.9
VIMP08670 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.17□□□□□ -1.9
VIMP08670 AC055855.1-201ENST00000489563 579 ntBASIC3.17□□□□□ -1.9
VIMP08670 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.17□□□□□ -1.9
VIMP08670 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.17□□□□□ -1.9
VIMP08670 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.17□□□□□ -1.9
VIMP08670 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.17□□□□□ -1.9
VIMP08670 MTND4LP31-201ENST00000514859 294 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms