Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.27□□□□□ -2.05
APOEP02649 AC008432.1-201ENST00000615912 1320 ntBASIC2.27□□□□□ -2.05
APOEP02649 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.27□□□□□ -2.05
APOEP02649 SNORA70B-201ENST00000384210 135 ntBASIC2.27□□□□□ -2.05
APOEP02649 U3.20-201ENST00000390909 217 ntBASIC2.27□□□□□ -2.05
APOEP02649 RNU6-882P-201ENST00000391025 103 ntBASIC2.27□□□□□ -2.05
APOEP02649 AL355497.1-201ENST00000406262 551 ntBASIC2.27□□□□□ -2.05
APOEP02649 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.27□□□□□ -2.05
APOEP02649 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.27□□□□□ -2.05
APOEP02649 DPH3P2-201ENST00000422618 250 ntBASIC2.27□□□□□ -2.05
APOEP02649 AL139415.2-201ENST00000431968 163 ntBASIC2.27□□□□□ -2.05
APOEP02649 RPL23AP16-201ENST00000441715 421 ntBASIC2.27□□□□□ -2.05
APOEP02649 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.27□□□□□ -2.05
APOEP02649 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
APOEP02649 EIF4EP3-201ENST00000498782 656 ntBASIC2.27□□□□□ -2.05
APOEP02649 GZMAP1-201ENST00000503054 631 ntBASIC2.27□□□□□ -2.05
APOEP02649 RNU6-798P-201ENST00000516912 103 ntBASIC2.27□□□□□ -2.05
APOEP02649 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.27□□□□□ -2.05
APOEP02649 GLYCAM1-201ENST00000546596 285 ntBASIC2.27□□□□□ -2.05
APOEP02649 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.27□□□□□ -2.05
APOEP02649 AC095057.3-201ENST00000567102 1157 ntBASIC2.27□□□□□ -2.05
APOEP02649 AC013562.2-201ENST00000611632 603 ntBASIC2.27□□□□□ -2.05
APOEP02649 AC025588.4-201ENST00000615802 908 ntBASIC2.27□□□□□ -2.05
APOEP02649 AC009090.3-201ENST00000616553 565 ntBASIC2.27□□□□□ -2.05
APOEP02649 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.27□□□□□ -2.05
APOEP02649 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.27□□□□□ -2.05
APOEP02649 AC008568.2-201ENST00000623862 2313 ntBASIC2.26□□□□□ -2.05
APOEP02649 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
APOEP02649 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
APOEP02649 AL109809.4-201ENST00000603520 2185 ntBASIC2.26□□□□□ -2.05
APOEP02649 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
APOEP02649 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.26□□□□□ -2.05
APOEP02649 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.26□□□□□ -2.05
APOEP02649 SNORA48.3-201ENST00000391081 134 ntBASIC2.26□□□□□ -2.05
APOEP02649 AL513475.1-201ENST00000406602 315 ntBASIC2.26□□□□□ -2.05
APOEP02649 U3.40-201ENST00000408706 208 ntBASIC2.26□□□□□ -2.05
APOEP02649 OR51A3P-201ENST00000413596 924 ntBASIC2.26□□□□□ -2.05
APOEP02649 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.26□□□□□ -2.05
APOEP02649 RPL27AP8-201ENST00000424277 446 ntBASIC2.26□□□□□ -2.05
APOEP02649 AC234781.2-201ENST00000426370 994 ntBASIC2.26□□□□□ -2.05
APOEP02649 RPL7L1P10-201ENST00000427790 463 ntBASIC2.26□□□□□ -2.05
APOEP02649 AL590623.1-201ENST00000427864 105 ntBASIC2.26□□□□□ -2.05
APOEP02649 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.26□□□□□ -2.05
APOEP02649 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.26□□□□□ -2.05
APOEP02649 FAM103A2P-201ENST00000444122 354 ntBASIC2.26□□□□□ -2.05
APOEP02649 AC096638.1-201ENST00000444678 216 ntBASIC2.26□□□□□ -2.05
APOEP02649 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
APOEP02649 DPPA3P1-201ENST00000448050 469 ntBASIC2.26□□□□□ -2.05
APOEP02649 MTCO3P2-201ENST00000457365 171 ntBASIC2.26□□□□□ -2.05
APOEP02649 AC090515.1-201ENST00000465295 476 ntBASIC2.26□□□□□ -2.05
APOEP02649 SCARNA16.3-201ENST00000516595 184 ntBASIC2.26□□□□□ -2.05
APOEP02649 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.26□□□□□ -2.05
APOEP02649 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.26□□□□□ -2.05
APOEP02649 OR5AK1P-201ENST00000524837 922 ntBASIC2.26□□□□□ -2.05
APOEP02649 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.26□□□□□ -2.05
APOEP02649 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.26□□□□□ -2.05
APOEP02649 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.26□□□□□ -2.05
APOEP02649 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.26□□□□□ -2.05
APOEP02649 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.26□□□□□ -2.05
APOEP02649 LRRC37A5P-203ENST00000580181 585 ntBASIC2.26□□□□□ -2.05
APOEP02649 MIR3117-201ENST00000584034 78 ntBASIC2.26□□□□□ -2.05
APOEP02649 GAS5-AS1-201ENST00000602767 694 ntBASIC2.26□□□□□ -2.05
APOEP02649 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.26□□□□□ -2.05
APOEP02649 AC097504.2-201ENST00000608088 454 ntBASIC2.26□□□□□ -2.05
APOEP02649 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.26□□□□□ -2.05
APOEP02649 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
APOEP02649 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.26□□□□□ -2.05
APOEP02649 TPTE2P4-201ENST00000258589 1605 ntBASIC2.25□□□□□ -2.05
APOEP02649 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.25□□□□□ -2.05
APOEP02649 HMGB1P5-201ENST00000255320 642 ntBASIC2.25□□□□□ -2.05
APOEP02649 SNORD51-201ENST00000384320 80 ntBASIC2.25□□□□□ -2.05
APOEP02649 HMGB1P11-201ENST00000413899 637 ntBASIC2.25□□□□□ -2.05
APOEP02649 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.25□□□□□ -2.05
APOEP02649 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.25□□□□□ -2.05
APOEP02649 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.25□□□□□ -2.05
APOEP02649 AL445687.1-201ENST00000439946 251 ntBASIC2.25□□□□□ -2.05
APOEP02649 AC092170.1-201ENST00000440211 356 ntBASIC2.25□□□□□ -2.05
APOEP02649 HMGN1P5-201ENST00000448591 263 ntBASIC2.25□□□□□ -2.05
APOEP02649 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.25□□□□□ -2.05
APOEP02649 AC104164.3-201ENST00000467363 1258 ntBASIC2.25□□□□□ -2.05
APOEP02649 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.25□□□□□ -2.05
APOEP02649 KLRA1P-201ENST00000503499 986 ntBASIC2.25□□□□□ -2.05
APOEP02649 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.25□□□□□ -2.05
APOEP02649 MRPS36P2-201ENST00000512569 299 ntBASIC2.25□□□□□ -2.05
APOEP02649 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.25□□□□□ -2.05
APOEP02649 TRAV28-201ENST00000557548 323 ntBASIC2.25□□□□□ -2.05
APOEP02649 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.25□□□□□ -2.05
APOEP02649 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.25□□□□□ -2.05
APOEP02649 AC023824.3-201ENST00000569003 562 ntBASIC2.25□□□□□ -2.05
APOEP02649 AC068135.2-201ENST00000569293 1028 ntBASIC2.25□□□□□ -2.05
APOEP02649 RPS3AP23-202ENST00000574601 686 ntBASIC2.25□□□□□ -2.05
APOEP02649 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.25□□□□□ -2.05
APOEP02649 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.25□□□□□ -2.05
APOEP02649 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.25□□□□□ -2.05
APOEP02649 AP001033.2-201ENST00000609701 1003 ntBASIC2.25□□□□□ -2.05
APOEP02649 VN1R74P-201ENST00000613259 503 ntBASIC2.25□□□□□ -2.05
APOEP02649 MIR1264-201ENST00000616374 69 ntBASIC2.25□□□□□ -2.05
APOEP02649 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.25□□□□□ -2.05
APOEP02649 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
APOEP02649 CR848007.1-201ENST00000442354 1699 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms