Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.71□□□□□ -2.14
TNFP01375 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.71□□□□□ -2.14
TNFP01375 AC010099.1-201ENST00000455434 375 ntBASIC1.71□□□□□ -2.14
TNFP01375 SNORD13-201ENST00000459299 104 ntBASIC1.71□□□□□ -2.14
TNFP01375 AC097493.1-201ENST00000463958 372 ntBASIC1.71□□□□□ -2.14
TNFP01375 EIF4EP3-201ENST00000498782 656 ntBASIC1.71□□□□□ -2.14
TNFP01375 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.71□□□□□ -2.14
TNFP01375 ATP5F1P5-201ENST00000526403 760 ntBASIC1.71□□□□□ -2.14
TNFP01375 XIAPP1-201ENST00000603162 600 ntBASIC1.71□□□□□ -2.14
TNFP01375 AL035411.2-201ENST00000604022 421 ntBASIC1.71□□□□□ -2.14
TNFP01375 AP001330.4-201ENST00000604350 154 ntBASIC1.71□□□□□ -2.14
TNFP01375 AC005332.10-201ENST00000612725 619 ntBASIC1.71□□□□□ -2.14
TNFP01375 AL590099.1-201ENST00000615276 138 ntBASIC1.71□□□□□ -2.14
TNFP01375 U6.48-201ENST00000618523 106 ntBASIC1.71□□□□□ -2.14
TNFP01375 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.71□□□□□ -2.14
TNFP01375 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.71□□□□□ -2.14
TNFP01375 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
TNFP01375 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
TNFP01375 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TNFP01375 NSRP1P1-201ENST00000444067 1693 ntBASIC1.71□□□□□ -2.14
TNFP01375 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.7□□□□□ -2.14
TNFP01375 SFR1P1-201ENST00000403720 688 ntBASIC1.7□□□□□ -2.14
TNFP01375 RNA5SP338-201ENST00000410495 85 ntBASIC1.7□□□□□ -2.14
TNFP01375 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.7□□□□□ -2.14
TNFP01375 MTCYBP45-201ENST00000435243 565 ntBASIC1.7□□□□□ -2.14
TNFP01375 USP9YP15-201ENST00000442391 422 ntBASIC1.7□□□□□ -2.14
TNFP01375 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC1.7□□□□□ -2.14
TNFP01375 PSPHP1-201ENST00000450062 261 ntBASIC1.7□□□□□ -2.14
TNFP01375 OR6C72P-201ENST00000451403 892 ntBASIC1.7□□□□□ -2.14
TNFP01375 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.7□□□□□ -2.14
TNFP01375 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.7□□□□□ -2.14
TNFP01375 IGKV2D-36-201ENST00000518643 226 ntBASIC1.7□□□□□ -2.14
TNFP01375 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.7□□□□□ -2.14
TNFP01375 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.7□□□□□ -2.14
TNFP01375 AC008669.1-201ENST00000565823 2178 ntBASIC1.7□□□□□ -2.14
TNFP01375 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.7□□□□□ -2.14
TNFP01375 ZNF92P3-201ENST00000596594 954 ntBASIC1.7□□□□□ -2.14
TNFP01375 AP000942.3-201ENST00000603702 160 ntBASIC1.7□□□□□ -2.14
TNFP01375 AC106900.2-201ENST00000604994 317 ntBASIC1.7□□□□□ -2.14
TNFP01375 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.7□□□□□ -2.14
TNFP01375 AL161629.2-201ENST00000615347 275 ntBASIC1.7□□□□□ -2.14
TNFP01375 uc_338.20-201ENST00000621563 178 ntBASIC1.7□□□□□ -2.14
TNFP01375 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.7□□□□□ -2.14
TNFP01375 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
TNFP01375 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.69□□□□□ -2.14
TNFP01375 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TNFP01375 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.69□□□□□ -2.14
TNFP01375 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.69□□□□□ -2.14
TNFP01375 UBE2V1P13-201ENST00000436983 439 ntBASIC1.69□□□□□ -2.14
TNFP01375 COX6CP12-201ENST00000446748 202 ntBASIC1.69□□□□□ -2.14
TNFP01375 RPL31P41-201ENST00000477967 372 ntBASIC1.69□□□□□ -2.14
TNFP01375 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.69□□□□□ -2.14
TNFP01375 MLLT10P2-201ENST00000506434 249 ntBASIC1.69□□□□□ -2.14
TNFP01375 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.69□□□□□ -2.14
TNFP01375 RNA5SP364-201ENST00000516938 78 ntBASIC1.69□□□□□ -2.14
TNFP01375 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.69□□□□□ -2.14
TNFP01375 AC090666.1-201ENST00000578241 445 ntBASIC1.69□□□□□ -2.14
TNFP01375 MIR3618-201ENST00000580330 88 ntBASIC1.69□□□□□ -2.14
TNFP01375 MIR3935-201ENST00000583472 104 ntBASIC1.69□□□□□ -2.14
TNFP01375 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.69□□□□□ -2.14
TNFP01375 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.69□□□□□ -2.14
TNFP01375 UCA1.1-201ENST00000620952 75 ntBASIC1.69□□□□□ -2.14
TNFP01375 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.69□□□□□ -2.14
TNFP01375 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.69□□□□□ -2.14
TNFP01375 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
TNFP01375 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TNFP01375 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.69□□□□□ -2.14
TNFP01375 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.69□□□□□ -2.14
TNFP01375 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
TNFP01375 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.68□□□□□ -2.14
TNFP01375 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.68□□□□□ -2.14
TNFP01375 CENPCP1-201ENST00000533085 2578 ntBASIC1.68□□□□□ -2.14
TNFP01375 AL161781.1-201ENST00000354277 403 ntBASIC1.68□□□□□ -2.14
TNFP01375 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
TNFP01375 SNORA3A-201ENST00000364113 130 ntBASIC1.68□□□□□ -2.14
TNFP01375 RNU6-374P-201ENST00000364146 108 ntBASIC1.68□□□□□ -2.14
TNFP01375 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
TNFP01375 MT-TC-201ENST00000387405 66 ntBASIC1.68□□□□□ -2.14
TNFP01375 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.68□□□□□ -2.14
TNFP01375 SUMO2P12-201ENST00000405924 140 ntBASIC1.68□□□□□ -2.14
TNFP01375 AL513475.1-201ENST00000406602 315 ntBASIC1.68□□□□□ -2.14
TNFP01375 SNORD23.1-201ENST00000408212 104 ntBASIC1.68□□□□□ -2.14
TNFP01375 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.68□□□□□ -2.14
TNFP01375 RNA5SP489-201ENST00000410986 109 ntBASIC1.68□□□□□ -2.14
TNFP01375 LUZP4P1-201ENST00000415420 344 ntBASIC1.68□□□□□ -2.14
TNFP01375 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.68□□□□□ -2.14
TNFP01375 NDUFA5P10-201ENST00000432147 357 ntBASIC1.68□□□□□ -2.14
TNFP01375 AL603825.1-201ENST00000438481 80 ntBASIC1.68□□□□□ -2.14
TNFP01375 AC092798.1-201ENST00000458542 409 ntBASIC1.68□□□□□ -2.14
TNFP01375 RPS27P26-201ENST00000494583 239 ntBASIC1.68□□□□□ -2.14
TNFP01375 AC108120.2-201ENST00000512973 294 ntBASIC1.68□□□□□ -2.14
TNFP01375 ANP32BP3-201ENST00000559213 706 ntBASIC1.68□□□□□ -2.14
TNFP01375 HSPE1P3-201ENST00000559254 309 ntBASIC1.68□□□□□ -2.14
TNFP01375 MTCO1P40-201ENST00000574371 625 ntBASIC1.68□□□□□ -2.14
TNFP01375 AC128687.1-201ENST00000605304 619 ntBASIC1.68□□□□□ -2.14
TNFP01375 SNORD14A-201ENST00000606526 91 ntBASIC1.68□□□□□ -2.14
TNFP01375 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.68□□□□□ -2.14
TNFP01375 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.68□□□□□ -2.14
TNFP01375 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
TNFP01375 AL022578.1-201ENST00000439330 1433 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms