Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.96□□□□□ -1.94
SDC3O75056 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SDC3O75056 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SDC3O75056 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SDC3O75056 AL161781.1-201ENST00000354277 403 ntBASIC2.96□□□□□ -1.94
SDC3O75056 RNU6-931P-201ENST00000363850 107 ntBASIC2.96□□□□□ -1.94
SDC3O75056 RNA5SP252-201ENST00000391131 119 ntBASIC2.96□□□□□ -1.94
SDC3O75056 AL008987.1-201ENST00000415528 237 ntBASIC2.96□□□□□ -1.94
SDC3O75056 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.96□□□□□ -1.94
SDC3O75056 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.96□□□□□ -1.94
SDC3O75056 AC092573.2-201ENST00000434546 243 ntBASIC2.96□□□□□ -1.94
SDC3O75056 ISCA1P2-201ENST00000438679 421 ntBASIC2.96□□□□□ -1.94
SDC3O75056 AL135938.1-201ENST00000443141 297 ntBASIC2.96□□□□□ -1.94
SDC3O75056 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.96□□□□□ -1.94
SDC3O75056 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.96□□□□□ -1.94
SDC3O75056 EEF1E1P1-201ENST00000446998 430 ntBASIC2.96□□□□□ -1.94
SDC3O75056 ANKRD26P4-201ENST00000455755 950 ntBASIC2.96□□□□□ -1.94
SDC3O75056 SNORD121B-201ENST00000458838 81 ntBASIC2.96□□□□□ -1.94
SDC3O75056 AC117440.1-201ENST00000474107 571 ntBASIC2.96□□□□□ -1.94
SDC3O75056 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.96□□□□□ -1.94
SDC3O75056 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.96□□□□□ -1.94
SDC3O75056 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.96□□□□□ -1.94
SDC3O75056 AC024589.1-201ENST00000512207 263 ntBASIC2.96□□□□□ -1.94
SDC3O75056 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.96□□□□□ -1.94
SDC3O75056 AC022483.1-201ENST00000514020 567 ntBASIC2.96□□□□□ -1.94
SDC3O75056 SCGB1D5P-201ENST00000515134 247 ntBASIC2.96□□□□□ -1.94
SDC3O75056 RNU6-714P-201ENST00000516963 103 ntBASIC2.96□□□□□ -1.94
SDC3O75056 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.96□□□□□ -1.94
SDC3O75056 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.96□□□□□ -1.94
SDC3O75056 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.96□□□□□ -1.94
SDC3O75056 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.96□□□□□ -1.94
SDC3O75056 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.96□□□□□ -1.94
SDC3O75056 MIR3921-201ENST00000577308 85 ntBASIC2.96□□□□□ -1.94
SDC3O75056 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.96□□□□□ -1.94
SDC3O75056 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.96□□□□□ -1.94
SDC3O75056 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.96□□□□□ -1.94
SDC3O75056 VN1R90P-201ENST00000595717 726 ntBASIC2.96□□□□□ -1.94
SDC3O75056 AP000254.1-201ENST00000609934 520 ntBASIC2.96□□□□□ -1.94
SDC3O75056 AL590099.1-201ENST00000615276 138 ntBASIC2.96□□□□□ -1.94
SDC3O75056 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
SDC3O75056 AC002550.2-201ENST00000621246 394 ntBASIC2.96□□□□□ -1.94
SDC3O75056 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.96□□□□□ -1.94
SDC3O75056 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.96□□□□□ -1.94
SDC3O75056 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.96□□□□□ -1.94
SDC3O75056 MTCO1P9-201ENST00000505577 1534 ntBASIC2.96□□□□□ -1.94
SDC3O75056 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SDC3O75056 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
SDC3O75056 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
SDC3O75056 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SDC3O75056 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.95□□□□□ -1.94
SDC3O75056 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SDC3O75056 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SDC3O75056 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SDC3O75056 RNU6-462P-201ENST00000362659 105 ntBASIC2.95□□□□□ -1.94
SDC3O75056 SNORA4.1-201ENST00000364263 144 ntBASIC2.95□□□□□ -1.94
SDC3O75056 RNU6-1197P-201ENST00000391183 107 ntBASIC2.95□□□□□ -1.94
SDC3O75056 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SDC3O75056 RPS3AP24-201ENST00000407896 734 ntBASIC2.95□□□□□ -1.94
SDC3O75056 RN7SKP123-201ENST00000410732 291 ntBASIC2.95□□□□□ -1.94
SDC3O75056 PIGPP2-201ENST00000411569 458 ntBASIC2.95□□□□□ -1.94
SDC3O75056 MTCO2P17-201ENST00000424336 677 ntBASIC2.95□□□□□ -1.94
SDC3O75056 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.95□□□□□ -1.94
SDC3O75056 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.95□□□□□ -1.94
SDC3O75056 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.95□□□□□ -1.94
SDC3O75056 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.95□□□□□ -1.94
SDC3O75056 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.95□□□□□ -1.94
SDC3O75056 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.95□□□□□ -1.94
SDC3O75056 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.95□□□□□ -1.94
SDC3O75056 MTND1P31-201ENST00000449206 961 ntBASIC2.95□□□□□ -1.94
SDC3O75056 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SDC3O75056 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SDC3O75056 AC006445.2-201ENST00000510061 472 ntBASIC2.95□□□□□ -1.94
SDC3O75056 AC093281.2-201ENST00000510153 597 ntBASIC2.95□□□□□ -1.94
SDC3O75056 AC109464.2-201ENST00000510242 943 ntBASIC2.95□□□□□ -1.94
SDC3O75056 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.95□□□□□ -1.94
SDC3O75056 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
SDC3O75056 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.95□□□□□ -1.94
SDC3O75056 MRPS36P3-201ENST00000519284 130 ntBASIC2.95□□□□□ -1.94
SDC3O75056 AC239860.2-201ENST00000525886 270 ntBASIC2.95□□□□□ -1.94
SDC3O75056 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.95□□□□□ -1.94
SDC3O75056 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SDC3O75056 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.95□□□□□ -1.94
SDC3O75056 AC105224.1-201ENST00000587055 421 ntBASIC2.95□□□□□ -1.94
SDC3O75056 HSPE1P7-201ENST00000604681 321 ntBASIC2.95□□□□□ -1.94
SDC3O75056 AC090186.1-201ENST00000605991 572 ntBASIC2.95□□□□□ -1.94
SDC3O75056 AL450472.3-201ENST00000615578 367 ntBASIC2.95□□□□□ -1.94
SDC3O75056 AL138880.2-201ENST00000616214 239 ntBASIC2.95□□□□□ -1.94
SDC3O75056 AL136981.2-201ENST00000617319 734 ntBASIC2.95□□□□□ -1.94
SDC3O75056 AC079228.1-201ENST00000624774 1049 ntBASIC2.95□□□□□ -1.94
SDC3O75056 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.95□□□□□ -1.94
SDC3O75056 AC103988.1-201ENST00000566382 2177 ntBASIC2.95□□□□□ -1.94
SDC3O75056 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.95□□□□□ -1.94
SDC3O75056 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SDC3O75056 AC092447.10-201ENST00000620607 1652 ntBASIC2.95□□□□□ -1.94
SDC3O75056 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.95□□□□□ -1.94
SDC3O75056 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SDC3O75056 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.94□□□□□ -1.94
SDC3O75056 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SDC3O75056 RNU5A-1-201ENST00000362698 116 ntBASIC2.94□□□□□ -1.94
SDC3O75056 RSL24D1P4-201ENST00000400938 484 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 154.7 ms