Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.39□□□□□ -2.03
SHOX2O60902 KLRA1P-201ENST00000503499 986 ntBASIC2.39□□□□□ -2.03
SHOX2O60902 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SHOX2O60902 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.39□□□□□ -2.03
SHOX2O60902 AL359273.1-201ENST00000510918 627 ntBASIC2.39□□□□□ -2.03
SHOX2O60902 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
SHOX2O60902 RPPH1-2P-201ENST00000516688 293 ntBASIC2.39□□□□□ -2.03
SHOX2O60902 MTCO1P47-201ENST00000523889 1271 ntBASIC2.39□□□□□ -2.03
SHOX2O60902 DEFB108D-201ENST00000527787 222 ntBASIC2.39□□□□□ -2.03
SHOX2O60902 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.39□□□□□ -2.03
SHOX2O60902 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.39□□□□□ -2.03
SHOX2O60902 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.39□□□□□ -2.03
SHOX2O60902 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.39□□□□□ -2.03
SHOX2O60902 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.39□□□□□ -2.03
SHOX2O60902 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.39□□□□□ -2.03
SHOX2O60902 AC013444.2-201ENST00000603317 787 ntBASIC2.39□□□□□ -2.03
SHOX2O60902 AL161734.1-201ENST00000609720 557 ntBASIC2.39□□□□□ -2.03
SHOX2O60902 AP000254.1-201ENST00000609934 520 ntBASIC2.39□□□□□ -2.03
SHOX2O60902 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.39□□□□□ -2.03
SHOX2O60902 AC026634.1-201ENST00000634369 198 ntBASIC2.39□□□□□ -2.03
SHOX2O60902 AP000526.1-201ENST00000603308 1388 ntBASIC2.38□□□□□ -2.03
SHOX2O60902 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
SHOX2O60902 RNU6-481P-201ENST00000384194 107 ntBASIC2.38□□□□□ -2.03
SHOX2O60902 MIR9-1-201ENST00000385198 89 ntBASIC2.38□□□□□ -2.03
SHOX2O60902 RNU6-932P-201ENST00000391108 106 ntBASIC2.38□□□□□ -2.03
SHOX2O60902 RNU6-1197P-201ENST00000391183 107 ntBASIC2.38□□□□□ -2.03
SHOX2O60902 RPS4XP8-201ENST00000402039 771 ntBASIC2.38□□□□□ -2.03
SHOX2O60902 RNA5SP184-201ENST00000411071 108 ntBASIC2.38□□□□□ -2.03
SHOX2O60902 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.38□□□□□ -2.03
SHOX2O60902 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SHOX2O60902 RNU6-717P-201ENST00000459076 104 ntBASIC2.38□□□□□ -2.03
SHOX2O60902 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.38□□□□□ -2.03
SHOX2O60902 RNA5SP458-201ENST00000516188 119 ntBASIC2.38□□□□□ -2.03
SHOX2O60902 RNU6-885P-201ENST00000516607 104 ntBASIC2.38□□□□□ -2.03
SHOX2O60902 RNU1-104P-201ENST00000517280 175 ntBASIC2.38□□□□□ -2.03
SHOX2O60902 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.38□□□□□ -2.03
SHOX2O60902 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SHOX2O60902 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.38□□□□□ -2.03
SHOX2O60902 SETP7-201ENST00000552169 453 ntBASIC2.38□□□□□ -2.03
SHOX2O60902 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.38□□□□□ -2.03
SHOX2O60902 AL731537.2-201ENST00000561565 951 ntBASIC2.38□□□□□ -2.03
SHOX2O60902 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.38□□□□□ -2.03
SHOX2O60902 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.38□□□□□ -2.03
SHOX2O60902 AC124283.4-201ENST00000581815 456 ntBASIC2.38□□□□□ -2.03
SHOX2O60902 AC016717.2-201ENST00000609089 5141 ntBASIC2.38□□□□□ -2.03
SHOX2O60902 AC005539.1-201ENST00000443768 1479 ntBASIC2.38□□□□□ -2.03
SHOX2O60902 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.38□□□□□ -2.03
SHOX2O60902 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SHOX2O60902 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SHOX2O60902 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
SHOX2O60902 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
SHOX2O60902 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.37□□□□□ -2.03
SHOX2O60902 SNORD62.1-201ENST00000362541 86 ntBASIC2.37□□□□□ -2.03
SHOX2O60902 RNU6-839P-201ENST00000363347 108 ntBASIC2.37□□□□□ -2.03
SHOX2O60902 Y_RNA.164-201ENST00000363709 102 ntBASIC2.37□□□□□ -2.03
SHOX2O60902 OR5H15-201ENST00000383696 930 ntBASIC2.37□□□□□ -2.03
SHOX2O60902 AC096533.1-201ENST00000411645 353 ntBASIC2.37□□□□□ -2.03
SHOX2O60902 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.37□□□□□ -2.03
SHOX2O60902 RSL24D1P8-201ENST00000434442 492 ntBASIC2.37□□□□□ -2.03
SHOX2O60902 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.37□□□□□ -2.03
SHOX2O60902 RPS24P13-201ENST00000442520 397 ntBASIC2.37□□□□□ -2.03
SHOX2O60902 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.37□□□□□ -2.03
SHOX2O60902 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.37□□□□□ -2.03
SHOX2O60902 AC055855.1-201ENST00000489563 579 ntBASIC2.37□□□□□ -2.03
SHOX2O60902 RPL30P5-201ENST00000494923 336 ntBASIC2.37□□□□□ -2.03
SHOX2O60902 RNU6-1102P-201ENST00000516149 96 ntBASIC2.37□□□□□ -2.03
SHOX2O60902 RN7SKP40-201ENST00000517211 242 ntBASIC2.37□□□□□ -2.03
SHOX2O60902 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.37□□□□□ -2.03
SHOX2O60902 SUB1P1-201ENST00000524415 382 ntBASIC2.37□□□□□ -2.03
SHOX2O60902 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SHOX2O60902 MTCYBP27-201ENST00000555160 670 ntBASIC2.37□□□□□ -2.03
SHOX2O60902 MIR4448-201ENST00000584360 86 ntBASIC2.37□□□□□ -2.03
SHOX2O60902 RN7SL622P-201ENST00000585292 275 ntBASIC2.37□□□□□ -2.03
SHOX2O60902 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.37□□□□□ -2.03
SHOX2O60902 AL161629.2-201ENST00000615347 275 ntBASIC2.37□□□□□ -2.03
SHOX2O60902 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.37□□□□□ -2.03
SHOX2O60902 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SHOX2O60902 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
SHOX2O60902 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
SHOX2O60902 OR4G11P-202ENST00000642116 1414 ntBASIC2.36□□□□□ -2.03
SHOX2O60902 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SHOX2O60902 AC016769.3-201ENST00000396562 315 ntBASIC2.36□□□□□ -2.03
SHOX2O60902 SFR1P2-201ENST00000421841 730 ntBASIC2.36□□□□□ -2.03
SHOX2O60902 AL121882.1-201ENST00000422893 417 ntBASIC2.36□□□□□ -2.03
SHOX2O60902 RPL7P37-201ENST00000425095 738 ntBASIC2.36□□□□□ -2.03
SHOX2O60902 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.36□□□□□ -2.03
SHOX2O60902 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.36□□□□□ -2.03
SHOX2O60902 MTCO3P43-201ENST00000440974 771 ntBASIC2.36□□□□□ -2.03
SHOX2O60902 RNF2P1-201ENST00000442955 1010 ntBASIC2.36□□□□□ -2.03
SHOX2O60902 RAC1P7-201ENST00000445367 377 ntBASIC2.36□□□□□ -2.03
SHOX2O60902 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SHOX2O60902 BOLA3P3-201ENST00000505182 232 ntBASIC2.36□□□□□ -2.03
SHOX2O60902 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.36□□□□□ -2.03
SHOX2O60902 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.36□□□□□ -2.03
SHOX2O60902 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.36□□□□□ -2.03
SHOX2O60902 OR5AK1P-201ENST00000524837 922 ntBASIC2.36□□□□□ -2.03
SHOX2O60902 AP001317.1-201ENST00000531194 960 ntBASIC2.36□□□□□ -2.03
SHOX2O60902 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.36□□□□□ -2.03
SHOX2O60902 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.36□□□□□ -2.03
SHOX2O60902 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms