Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RPS3AP14-201ENST00000483907 780 ntBASIC3.62□□□□□ -1.83
LDB2O43679 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.62□□□□□ -1.83
LDB2O43679 RNU6-579P-201ENST00000516879 102 ntBASIC3.62□□□□□ -1.83
LDB2O43679 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.62□□□□□ -1.83
LDB2O43679 RANP9-201ENST00000519957 271 ntBASIC3.62□□□□□ -1.83
LDB2O43679 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.62□□□□□ -1.83
LDB2O43679 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.62□□□□□ -1.83
LDB2O43679 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.62□□□□□ -1.83
LDB2O43679 MIR3146-201ENST00000580367 79 ntBASIC3.62□□□□□ -1.83
LDB2O43679 AC011451.2-201ENST00000604303 598 ntBASIC3.62□□□□□ -1.83
LDB2O43679 AC006077.1-201ENST00000604746 343 ntBASIC3.62□□□□□ -1.83
LDB2O43679 uc_338.32-201ENST00000615087 172 ntBASIC3.62□□□□□ -1.83
LDB2O43679 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.62□□□□□ -1.83
LDB2O43679 AL034408.1-202ENST00000636088 415 ntBASIC3.62□□□□□ -1.83
LDB2O43679 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
LDB2O43679 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
LDB2O43679 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LDB2O43679 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LDB2O43679 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
LDB2O43679 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
LDB2O43679 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
LDB2O43679 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LDB2O43679 AC007685.1-201ENST00000329806 452 ntBASIC3.61□□□□□ -1.83
LDB2O43679 Y_RNA.1-201ENST00000352915 104 ntBASIC3.61□□□□□ -1.83
LDB2O43679 Y_RNA.372-201ENST00000365599 102 ntBASIC3.61□□□□□ -1.83
LDB2O43679 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
LDB2O43679 MIR449B-201ENST00000384995 97 ntBASIC3.61□□□□□ -1.83
LDB2O43679 SNORD115-47-201ENST00000391226 86 ntBASIC3.61□□□□□ -1.83
LDB2O43679 CALM2P3-201ENST00000400429 449 ntBASIC3.61□□□□□ -1.83
LDB2O43679 AL590002.1-201ENST00000406554 418 ntBASIC3.61□□□□□ -1.83
LDB2O43679 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.61□□□□□ -1.83
LDB2O43679 AC006946.1-201ENST00000429106 328 ntBASIC3.61□□□□□ -1.83
LDB2O43679 MTCO2P11-201ENST00000431069 680 ntBASIC3.61□□□□□ -1.83
LDB2O43679 AC000111.3-201ENST00000433478 193 ntBASIC3.61□□□□□ -1.83
LDB2O43679 CKS1BP5-201ENST00000434172 273 ntBASIC3.61□□□□□ -1.83
LDB2O43679 AC119618.1-201ENST00000434191 222 ntBASIC3.61□□□□□ -1.83
LDB2O43679 AC002486.1-201ENST00000435098 391 ntBASIC3.61□□□□□ -1.83
LDB2O43679 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
LDB2O43679 USP9YP15-201ENST00000442391 422 ntBASIC3.61□□□□□ -1.83
LDB2O43679 MTND4P18-201ENST00000447010 465 ntBASIC3.61□□□□□ -1.83
LDB2O43679 AC132479.1-201ENST00000449160 144 ntBASIC3.61□□□□□ -1.83
LDB2O43679 HMGB3P30-201ENST00000457863 606 ntBASIC3.61□□□□□ -1.83
LDB2O43679 MTCO2P29-201ENST00000465212 189 ntBASIC3.61□□□□□ -1.83
LDB2O43679 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.61□□□□□ -1.83
LDB2O43679 RPS3AP50-201ENST00000487064 803 ntBASIC3.61□□□□□ -1.83
LDB2O43679 AC007182.2-201ENST00000489251 402 ntBASIC3.61□□□□□ -1.83
LDB2O43679 AC019235.1-201ENST00000503847 207 ntBASIC3.61□□□□□ -1.83
LDB2O43679 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.61□□□□□ -1.83
LDB2O43679 AC017037.2-201ENST00000513850 890 ntBASIC3.61□□□□□ -1.83
LDB2O43679 RNU1-95P-201ENST00000516357 160 ntBASIC3.61□□□□□ -1.83
LDB2O43679 RNU1-128P-201ENST00000516704 160 ntBASIC3.61□□□□□ -1.83
LDB2O43679 AP006245.1-201ENST00000522549 120 ntBASIC3.61□□□□□ -1.83
LDB2O43679 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.61□□□□□ -1.83
LDB2O43679 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.61□□□□□ -1.83
LDB2O43679 RNA5SP108-201ENST00000605921 117 ntBASIC3.61□□□□□ -1.83
LDB2O43679 SNORA51-201ENST00000606420 132 ntBASIC3.61□□□□□ -1.83
LDB2O43679 AC007014.2-201ENST00000615581 479 ntBASIC3.61□□□□□ -1.83
LDB2O43679 U73479.1-201ENST00000618062 168 ntBASIC3.61□□□□□ -1.83
LDB2O43679 AL159972.1-201ENST00000625150 448 ntBASIC3.61□□□□□ -1.83
LDB2O43679 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.61□□□□□ -1.83
LDB2O43679 LRRC77P-213ENST00000637727 880 ntBASIC3.61□□□□□ -1.83
LDB2O43679 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.61□□□□□ -1.83
LDB2O43679 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
LDB2O43679 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LDB2O43679 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
LDB2O43679 AC007823.1-201ENST00000569932 1566 ntBASIC3.6□□□□□ -1.83
LDB2O43679 CEP170P1-201ENST00000502249 4587 ntBASIC3.6□□□□□ -1.83
LDB2O43679 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
LDB2O43679 RNU6-181P-201ENST00000363225 107 ntBASIC3.6□□□□□ -1.83
LDB2O43679 RNY4P16-201ENST00000364768 94 ntBASIC3.6□□□□□ -1.83
LDB2O43679 RNU6-282P-201ENST00000365357 103 ntBASIC3.6□□□□□ -1.83
LDB2O43679 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.6□□□□□ -1.83
LDB2O43679 SNORA5A-201ENST00000384111 134 ntBASIC3.6□□□□□ -1.83
LDB2O43679 Y_RNA.450-201ENST00000384198 113 ntBASIC3.6□□□□□ -1.83
LDB2O43679 RPL21P17-201ENST00000397467 475 ntBASIC3.6□□□□□ -1.83
LDB2O43679 U3.39-201ENST00000408569 239 ntBASIC3.6□□□□□ -1.83
LDB2O43679 MIR1183-201ENST00000408856 89 ntBASIC3.6□□□□□ -1.83
LDB2O43679 ATP5A1P2-201ENST00000412323 255 ntBASIC3.6□□□□□ -1.83
LDB2O43679 AL035423.1-201ENST00000420331 213 ntBASIC3.6□□□□□ -1.83
LDB2O43679 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.6□□□□□ -1.83
LDB2O43679 AC002075.2-201ENST00000425207 252 ntBASIC3.6□□□□□ -1.83
LDB2O43679 MTND1P2-201ENST00000430604 821 ntBASIC3.6□□□□□ -1.83
LDB2O43679 MRPS18BP2-201ENST00000434310 759 ntBASIC3.6□□□□□ -1.83
LDB2O43679 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LDB2O43679 FTH1P1-201ENST00000437933 532 ntBASIC3.6□□□□□ -1.83
LDB2O43679 MTATP6P23-201ENST00000440153 476 ntBASIC3.6□□□□□ -1.83
LDB2O43679 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.6□□□□□ -1.83
LDB2O43679 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LDB2O43679 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.6□□□□□ -1.83
LDB2O43679 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.6□□□□□ -1.83
LDB2O43679 snoU13.3-201ENST00000459441 104 ntBASIC3.6□□□□□ -1.83
LDB2O43679 AP000873.1-201ENST00000463987 400 ntBASIC3.6□□□□□ -1.83
LDB2O43679 ARL4AP2-201ENST00000507378 601 ntBASIC3.6□□□□□ -1.83
LDB2O43679 AC009646.1-201ENST00000510455 318 ntBASIC3.6□□□□□ -1.83
LDB2O43679 ARL2BPP6-201ENST00000512757 439 ntBASIC3.6□□□□□ -1.83
LDB2O43679 RNU6-445P-201ENST00000516949 107 ntBASIC3.6□□□□□ -1.83
LDB2O43679 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.6□□□□□ -1.83
LDB2O43679 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.6□□□□□ -1.83
LDB2O43679 CBX3P5-201ENST00000552017 521 ntBASIC3.6□□□□□ -1.83
LDB2O43679 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms