Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.61□□□□□ -1.99
LSM1O15116 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.61□□□□□ -1.99
LSM1O15116 MIR5694-201ENST00000581190 76 ntBASIC2.61□□□□□ -1.99
LSM1O15116 AC007179.3-201ENST00000604976 235 ntBASIC2.61□□□□□ -1.99
LSM1O15116 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LSM1O15116 MIR6895-201ENST00000613497 78 ntBASIC2.61□□□□□ -1.99
LSM1O15116 AL392048.1-201ENST00000613946 534 ntBASIC2.61□□□□□ -1.99
LSM1O15116 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.61□□□□□ -1.99
LSM1O15116 AC002550.2-201ENST00000621246 394 ntBASIC2.61□□□□□ -1.99
LSM1O15116 AL049641.1-201ENST00000441055 1948 ntBASIC2.61□□□□□ -1.99
LSM1O15116 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
LSM1O15116 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
LSM1O15116 CR848007.1-201ENST00000442354 1699 ntBASIC2.6□□□□□ -1.99
LSM1O15116 CDR1-202ENST00000625883 1485 ntBASIC2.6□□□□□ -1.99
LSM1O15116 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LSM1O15116 RNU5A-1-201ENST00000362698 116 ntBASIC2.6□□□□□ -1.99
LSM1O15116 SNORA18.3-201ENST00000384122 132 ntBASIC2.6□□□□□ -1.99
LSM1O15116 SNORA80E-201ENST00000384744 137 ntBASIC2.6□□□□□ -1.99
LSM1O15116 UBA52P6-201ENST00000399822 382 ntBASIC2.6□□□□□ -1.99
LSM1O15116 RNU2-42P-201ENST00000410697 113 ntBASIC2.6□□□□□ -1.99
LSM1O15116 AC068533.2-201ENST00000411872 306 ntBASIC2.6□□□□□ -1.99
LSM1O15116 AL024507.1-201ENST00000412741 274 ntBASIC2.6□□□□□ -1.99
LSM1O15116 AL161449.1-201ENST00000414531 1199 ntBASIC2.6□□□□□ -1.99
LSM1O15116 AC019070.1-201ENST00000415008 1024 ntBASIC2.6□□□□□ -1.99
LSM1O15116 AC007435.1-201ENST00000421086 415 ntBASIC2.6□□□□□ -1.99
LSM1O15116 MTCO2P5-201ENST00000422621 426 ntBASIC2.6□□□□□ -1.99
LSM1O15116 AC018630.2-202ENST00000422992 927 ntBASIC2.6□□□□□ -1.99
LSM1O15116 AC092047.1-201ENST00000424997 240 ntBASIC2.6□□□□□ -1.99
LSM1O15116 SDCBPP1-201ENST00000440192 890 ntBASIC2.6□□□□□ -1.99
LSM1O15116 BNIP3P2-201ENST00000441221 577 ntBASIC2.6□□□□□ -1.99
LSM1O15116 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.6□□□□□ -1.99
LSM1O15116 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
LSM1O15116 AC011753.1-201ENST00000451001 220 ntBASIC2.6□□□□□ -1.99
LSM1O15116 RBM43P1-201ENST00000476891 1081 ntBASIC2.6□□□□□ -1.99
LSM1O15116 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
LSM1O15116 AC147055.4-201ENST00000504399 745 ntBASIC2.6□□□□□ -1.99
LSM1O15116 SLC25A15P5-201ENST00000508033 253 ntBASIC2.6□□□□□ -1.99
LSM1O15116 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.6□□□□□ -1.99
LSM1O15116 HMGB3P3-201ENST00000510526 400 ntBASIC2.6□□□□□ -1.99
LSM1O15116 RNU6-1225P-201ENST00000516336 65 ntBASIC2.6□□□□□ -1.99
LSM1O15116 RNU6-1028P-201ENST00000517164 93 ntBASIC2.6□□□□□ -1.99
LSM1O15116 IGLV3-17-201ENST00000519099 244 ntBASIC2.6□□□□□ -1.99
LSM1O15116 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LSM1O15116 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.6□□□□□ -1.99
LSM1O15116 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.6□□□□□ -1.99
LSM1O15116 SLC2A13P1-201ENST00000531560 322 ntBASIC2.6□□□□□ -1.99
LSM1O15116 AC087894.1-201ENST00000538359 518 ntBASIC2.6□□□□□ -1.99
LSM1O15116 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.6□□□□□ -1.99
LSM1O15116 MIR3912-201ENST00000577566 105 ntBASIC2.6□□□□□ -1.99
LSM1O15116 TPMTP1-201ENST00000592307 737 ntBASIC2.6□□□□□ -1.99
LSM1O15116 AC004067.1-201ENST00000608733 700 ntBASIC2.6□□□□□ -1.99
LSM1O15116 AC103710.4-201ENST00000609301 899 ntBASIC2.6□□□□□ -1.99
LSM1O15116 AC096577.2-201ENST00000611455 153 ntBASIC2.6□□□□□ -1.99
LSM1O15116 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.6□□□□□ -1.99
LSM1O15116 UCA1.1-201ENST00000620952 75 ntBASIC2.6□□□□□ -1.99
LSM1O15116 AP003485.1-201ENST00000625093 753 ntBASIC2.6□□□□□ -1.99
LSM1O15116 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.6□□□□□ -1.99
LSM1O15116 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
LSM1O15116 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.59□□□□□ -1.99
LSM1O15116 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
LSM1O15116 RNU6-343P-201ENST00000364709 104 ntBASIC2.59□□□□□ -1.99
LSM1O15116 RNU1-140P-201ENST00000365040 165 ntBASIC2.59□□□□□ -1.99
LSM1O15116 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
LSM1O15116 Y_RNA.408-201ENST00000383987 102 ntBASIC2.59□□□□□ -1.99
LSM1O15116 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
LSM1O15116 AC007064.1-201ENST00000412238 351 ntBASIC2.59□□□□□ -1.99
LSM1O15116 TPMTP2-201ENST00000414372 726 ntBASIC2.59□□□□□ -1.99
LSM1O15116 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.59□□□□□ -1.99
LSM1O15116 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.59□□□□□ -1.99
LSM1O15116 MTCO3P11-201ENST00000455103 774 ntBASIC2.59□□□□□ -1.99
LSM1O15116 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.59□□□□□ -1.99
LSM1O15116 SNORD121B-201ENST00000458838 81 ntBASIC2.59□□□□□ -1.99
LSM1O15116 AC087588.1-201ENST00000462203 316 ntBASIC2.59□□□□□ -1.99
LSM1O15116 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.59□□□□□ -1.99
LSM1O15116 HMGB1P28-201ENST00000507778 552 ntBASIC2.59□□□□□ -1.99
LSM1O15116 HIGD1AP13-201ENST00000509878 289 ntBASIC2.59□□□□□ -1.99
LSM1O15116 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.59□□□□□ -1.99
LSM1O15116 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.59□□□□□ -1.99
LSM1O15116 AC112198.4-201ENST00000515450 351 ntBASIC2.59□□□□□ -1.99
LSM1O15116 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.59□□□□□ -1.99
LSM1O15116 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.59□□□□□ -1.99
LSM1O15116 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.59□□□□□ -1.99
LSM1O15116 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.59□□□□□ -1.99
LSM1O15116 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.59□□□□□ -1.99
LSM1O15116 AC121758.2-201ENST00000553271 193 ntBASIC2.59□□□□□ -1.99
LSM1O15116 AC007954.1-201ENST00000554198 494 ntBASIC2.59□□□□□ -1.99
LSM1O15116 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.59□□□□□ -1.99
LSM1O15116 AL158211.2-201ENST00000607282 395 ntBASIC2.59□□□□□ -1.99
LSM1O15116 DUXAP10-204ENST00000612052 616 ntBASIC2.59□□□□□ -1.99
LSM1O15116 AC243773.3-201ENST00000613270 256 ntBASIC2.59□□□□□ -1.99
LSM1O15116 AC018926.1-201ENST00000616335 435 ntBASIC2.59□□□□□ -1.99
LSM1O15116 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.59□□□□□ -1.99
LSM1O15116 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.59□□□□□ -1.99
LSM1O15116 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.59□□□□□ -1.99
LSM1O15116 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
LSM1O15116 AL356473.1-201ENST00000406203 1408 ntBASIC2.59□□□□□ -2
LSM1O15116 AC007785.2-201ENST00000598627 1916 ntBASIC2.58□□□□□ -2
LSM1O15116 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
LSM1O15116 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.58□□□□□ -2
LSM1O15116 AC022336.2-201ENST00000568966 2538 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms