Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 NANOGNBP1-201ENST00000448444 480 ntBASIC3.66□□□□□ -1.82
ATP2A1O14983 SNORD121B-201ENST00000458838 81 ntBASIC3.66□□□□□ -1.82
ATP2A1O14983 VN1R17P-201ENST00000472048 1090 ntBASIC3.66□□□□□ -1.82
ATP2A1O14983 AC021382.1-201ENST00000483523 359 ntBASIC3.66□□□□□ -1.82
ATP2A1O14983 RPL23AP55-201ENST00000498163 452 ntBASIC3.66□□□□□ -1.82
ATP2A1O14983 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.66□□□□□ -1.82
ATP2A1O14983 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.66□□□□□ -1.82
ATP2A1O14983 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.66□□□□□ -1.82
ATP2A1O14983 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.66□□□□□ -1.82
ATP2A1O14983 RNU6-1095P-201ENST00000516148 108 ntBASIC3.66□□□□□ -1.82
ATP2A1O14983 MIR2276-201ENST00000516886 89 ntBASIC3.66□□□□□ -1.82
ATP2A1O14983 MTCYBP41-201ENST00000528913 1123 ntBASIC3.66□□□□□ -1.82
ATP2A1O14983 AC126177.3-201ENST00000551839 688 ntBASIC3.66□□□□□ -1.82
ATP2A1O14983 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.66□□□□□ -1.82
ATP2A1O14983 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.66□□□□□ -1.82
ATP2A1O14983 NBR2-204ENST00000587322 63 ntBASIC3.66□□□□□ -1.82
ATP2A1O14983 AL031176.1-201ENST00000604554 466 ntBASIC3.66□□□□□ -1.82
ATP2A1O14983 AL137843.1-201ENST00000605078 385 ntBASIC3.66□□□□□ -1.82
ATP2A1O14983 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.66□□□□□ -1.82
ATP2A1O14983 AL590099.1-201ENST00000615276 138 ntBASIC3.66□□□□□ -1.82
ATP2A1O14983 AC009090.3-201ENST00000616553 565 ntBASIC3.66□□□□□ -1.82
ATP2A1O14983 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATP2A1O14983 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ATP2A1O14983 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.66□□□□□ -1.82
ATP2A1O14983 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ATP2A1O14983 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.65□□□□□ -1.82
ATP2A1O14983 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
ATP2A1O14983 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
ATP2A1O14983 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
ATP2A1O14983 RIOK3P1-201ENST00000418778 1528 ntBASIC3.65□□□□□ -1.82
ATP2A1O14983 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
ATP2A1O14983 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
ATP2A1O14983 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
ATP2A1O14983 RNU5F-7P-201ENST00000363696 115 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 AL138880.1-201ENST00000405824 642 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 RN7SKP220-201ENST00000410611 288 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 RNU2-47P-201ENST00000410649 186 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 RAD23BP2-201ENST00000416003 1207 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 MTCO3P12-201ENST00000416718 547 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 CYCSP46-201ENST00000423569 204 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.65□□□□□ -1.83
ATP2A1O14983 HMGB1P12-201ENST00000438594 598 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 TRIM60P18-201ENST00000441518 828 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 RPL7P36-201ENST00000444633 681 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.65□□□□□ -1.83
ATP2A1O14983 AC104308.1-201ENST00000454621 333 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 RNU7-170P-201ENST00000459303 61 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ATP2A1O14983 AC080014.1-201ENST00000496877 1201 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 AC097462.2-201ENST00000504623 481 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.65□□□□□ -1.83
ATP2A1O14983 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ATP2A1O14983 AC017037.2-201ENST00000513850 890 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 AC008885.1-201ENST00000514930 301 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.65□□□□□ -1.83
ATP2A1O14983 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.65□□□□□ -1.83
ATP2A1O14983 AP003497.1-201ENST00000528472 562 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.65□□□□□ -1.83
ATP2A1O14983 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.65□□□□□ -1.83
ATP2A1O14983 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.65□□□□□ -1.83
ATP2A1O14983 SYF2P1-201ENST00000550658 413 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.65□□□□□ -1.83
ATP2A1O14983 AC012182.1-201ENST00000570133 895 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.65□□□□□ -1.83
ATP2A1O14983 UBL5P2-201ENST00000583788 219 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 AC083760.1-201ENST00000589621 670 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 AL451007.1-201ENST00000595491 289 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 XIAPP1-201ENST00000603162 600 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 AC011451.2-201ENST00000604303 598 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 AC135507.1-201ENST00000607214 561 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 AC091965.4-201ENST00000607691 587 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 AC100793.4-201ENST00000613683 429 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 uc_338.25-201ENST00000613756 156 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 AL158063.1-201ENST00000615349 536 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 AC002550.2-201ENST00000621246 394 ntBASIC3.65□□□□□ -1.83
ATP2A1O14983 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ATP2A1O14983 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ATP2A1O14983 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
ATP2A1O14983 AC138915.3-201ENST00000562908 1389 ntBASIC3.64□□□□□ -1.83
ATP2A1O14983 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ATP2A1O14983 RNU6-1155P-201ENST00000363554 107 ntBASIC3.64□□□□□ -1.83
ATP2A1O14983 U3.26-201ENST00000391236 204 ntBASIC3.64□□□□□ -1.83
ATP2A1O14983 RPL17P12-201ENST00000413391 526 ntBASIC3.64□□□□□ -1.83
ATP2A1O14983 RPL31P12-201ENST00000422587 358 ntBASIC3.64□□□□□ -1.83
ATP2A1O14983 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.64□□□□□ -1.83
ATP2A1O14983 MTND4P32-201ENST00000437189 1237 ntBASIC3.64□□□□□ -1.83
ATP2A1O14983 FAM103A2P-201ENST00000444122 354 ntBASIC3.64□□□□□ -1.83
ATP2A1O14983 COX6CP2-201ENST00000444980 225 ntBASIC3.64□□□□□ -1.83
ATP2A1O14983 Z99127.3-201ENST00000448158 395 ntBASIC3.64□□□□□ -1.83
ATP2A1O14983 MRPS31P2-201ENST00000451581 518 ntBASIC3.64□□□□□ -1.83
ATP2A1O14983 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.64□□□□□ -1.83
ATP2A1O14983 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.64□□□□□ -1.83
ATP2A1O14983 AC010401.1-201ENST00000463867 348 ntBASIC3.64□□□□□ -1.83
ATP2A1O14983 AP000797.1-201ENST00000478870 387 ntBASIC3.64□□□□□ -1.83
ATP2A1O14983 HMGB1P22-201ENST00000505315 124 ntBASIC3.64□□□□□ -1.83
ATP2A1O14983 AC117532.1-201ENST00000514638 323 ntBASIC3.64□□□□□ -1.83
ATP2A1O14983 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.64□□□□□ -1.83
ATP2A1O14983 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.64□□□□□ -1.83
ATP2A1O14983 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.64□□□□□ -1.83
ATP2A1O14983 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms