Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
RFXAPO00287 FTH1P21-201ENST00000512179 511 ntBASIC4.7□□□□□ -1.66
RFXAPO00287 Y_RNA.721-201ENST00000517207 102 ntBASIC4.7□□□□□ -1.66
RFXAPO00287 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.7□□□□□ -1.66
RFXAPO00287 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.7□□□□□ -1.66
RFXAPO00287 AC090136.1-201ENST00000520009 240 ntBASIC4.7□□□□□ -1.66
RFXAPO00287 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.7□□□□□ -1.66
RFXAPO00287 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.7□□□□□ -1.66
RFXAPO00287 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.7□□□□□ -1.66
RFXAPO00287 MIR4703-201ENST00000577728 79 ntBASIC4.7□□□□□ -1.66
RFXAPO00287 AC138761.3-201ENST00000579993 334 ntBASIC4.7□□□□□ -1.66
RFXAPO00287 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.7□□□□□ -1.66
RFXAPO00287 AL031666.3-201ENST00000609320 1006 ntBASIC4.7□□□□□ -1.66
RFXAPO00287 AC103710.2-201ENST00000609912 942 ntBASIC4.7□□□□□ -1.66
RFXAPO00287 AC130324.3-201ENST00000614165 542 ntBASIC4.7□□□□□ -1.66
RFXAPO00287 MIR6891-201ENST00000618788 93 ntBASIC4.7□□□□□ -1.66
RFXAPO00287 AC137590.2-201ENST00000619709 240 ntBASIC4.7□□□□□ -1.66
RFXAPO00287 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.7□□□□□ -1.66
RFXAPO00287 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFXAPO00287 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.7□□□□□ -1.66
RFXAPO00287 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.7□□□□□ -1.66
RFXAPO00287 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFXAPO00287 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFXAPO00287 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RFXAPO00287 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFXAPO00287 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFXAPO00287 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RFXAPO00287 AL022322.2-201ENST00000624072 20397 ntBASIC4.69□□□□□ -1.66
RFXAPO00287 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RFXAPO00287 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RFXAPO00287 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RFXAPO00287 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.69□□□□□ -1.66
RFXAPO00287 Y_RNA.252-201ENST00000364556 101 ntBASIC4.69□□□□□ -1.66
RFXAPO00287 RNU6-99P-201ENST00000364721 107 ntBASIC4.69□□□□□ -1.66
RFXAPO00287 SNORA73.2-201ENST00000364946 201 ntBASIC4.69□□□□□ -1.66
RFXAPO00287 RNY3P13-201ENST00000365542 102 ntBASIC4.69□□□□□ -1.66
RFXAPO00287 UBBP2-201ENST00000376781 231 ntBASIC4.69□□□□□ -1.66
RFXAPO00287 Y_RNA.482-201ENST00000384377 111 ntBASIC4.69□□□□□ -1.66
RFXAPO00287 AP000580.1-201ENST00000404439 358 ntBASIC4.69□□□□□ -1.66
RFXAPO00287 RNU2-64P-201ENST00000411315 191 ntBASIC4.69□□□□□ -1.66
RFXAPO00287 COX6B1P7-201ENST00000430845 235 ntBASIC4.69□□□□□ -1.66
RFXAPO00287 TIMM9P1-201ENST00000436122 256 ntBASIC4.69□□□□□ -1.66
RFXAPO00287 AC012671.1-201ENST00000451912 203 ntBASIC4.69□□□□□ -1.66
RFXAPO00287 MTCO3P2-201ENST00000457365 171 ntBASIC4.69□□□□□ -1.66
RFXAPO00287 RPL5P30-201ENST00000465511 891 ntBASIC4.69□□□□□ -1.66
RFXAPO00287 AC097473.1-201ENST00000508142 408 ntBASIC4.69□□□□□ -1.66
RFXAPO00287 RNA5SP519-201ENST00000516480 119 ntBASIC4.69□□□□□ -1.66
RFXAPO00287 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.69□□□□□ -1.66
RFXAPO00287 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.69□□□□□ -1.66
RFXAPO00287 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.69□□□□□ -1.66
RFXAPO00287 AC018552.3-201ENST00000567416 561 ntBASIC4.69□□□□□ -1.66
RFXAPO00287 AC233702.9-201ENST00000581528 203 ntBASIC4.69□□□□□ -1.66
RFXAPO00287 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.69□□□□□ -1.66
RFXAPO00287 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.69□□□□□ -1.66
RFXAPO00287 uc_338.12-201ENST00000616344 181 ntBASIC4.69□□□□□ -1.66
RFXAPO00287 AC008013.2-202ENST00000637965 364 ntBASIC4.69□□□□□ -1.66
RFXAPO00287 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
RFXAPO00287 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFXAPO00287 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.69□□□□□ -1.66
RFXAPO00287 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RFXAPO00287 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFXAPO00287 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RFXAPO00287 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFXAPO00287 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RFXAPO00287 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RFXAPO00287 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.69□□□□□ -1.66
RFXAPO00287 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFXAPO00287 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFXAPO00287 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFXAPO00287 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFXAPO00287 AC027228.2-201ENST00000567141 2154 ntBASIC4.68□□□□□ -1.66
RFXAPO00287 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFXAPO00287 TRIM51GP-201ENST00000534741 1350 ntBASIC4.68□□□□□ -1.66
RFXAPO00287 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFXAPO00287 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFXAPO00287 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFXAPO00287 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RFXAPO00287 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RFXAPO00287 Y_RNA.212-201ENST00000364177 102 ntBASIC4.68□□□□□ -1.66
RFXAPO00287 RNU6-1062P-201ENST00000383908 107 ntBASIC4.68□□□□□ -1.66
RFXAPO00287 SNORA51.6-201ENST00000384151 125 ntBASIC4.68□□□□□ -1.66
RFXAPO00287 SNORA9-201ENST00000384215 133 ntBASIC4.68□□□□□ -1.66
RFXAPO00287 MIR558-201ENST00000384920 94 ntBASIC4.68□□□□□ -1.66
RFXAPO00287 MIR449B-201ENST00000384995 97 ntBASIC4.68□□□□□ -1.66
RFXAPO00287 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RFXAPO00287 RNA5SP36-201ENST00000410197 133 ntBASIC4.68□□□□□ -1.66
RFXAPO00287 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.68□□□□□ -1.66
RFXAPO00287 AL133547.1-201ENST00000448546 220 ntBASIC4.68□□□□□ -1.66
RFXAPO00287 PABPC1P3-201ENST00000469174 459 ntBASIC4.68□□□□□ -1.66
RFXAPO00287 RPL23AP11-201ENST00000475260 469 ntBASIC4.68□□□□□ -1.66
RFXAPO00287 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.68□□□□□ -1.66
RFXAPO00287 Y_RNA.654-201ENST00000497848 106 ntBASIC4.68□□□□□ -1.66
RFXAPO00287 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.68□□□□□ -1.66
RFXAPO00287 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.68□□□□□ -1.66
RFXAPO00287 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.68□□□□□ -1.66
RFXAPO00287 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.68□□□□□ -1.66
RFXAPO00287 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RFXAPO00287 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.68□□□□□ -1.66
RFXAPO00287 HSPE1P5-201ENST00000561489 272 ntBASIC4.68□□□□□ -1.66
RFXAPO00287 AC115085.1-201ENST00000588924 229 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms