Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SNORA5A-201ENST00000384111 134 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 RNU6-769P-201ENST00000384407 104 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 TXNP7-201ENST00000406296 293 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 RNA5SP274-201ENST00000410484 108 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC188H7C350 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC188H7C350 VPS26BP1-201ENST00000417155 755 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 SYF2P2-201ENST00000417620 583 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC188H7C350 USP9YP36-201ENST00000424581 829 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 AL445584.1-201ENST00000431451 330 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 AL162389.1-201ENST00000449233 177 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 RPL36AP33-201ENST00000450395 310 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC188H7C350 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC188H7C350 ACTR3P3-201ENST00000480448 893 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 RPS15AP36-201ENST00000492022 382 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC188H7C350 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
CCDC188H7C350 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC188H7C350 AC010265.1-201ENST00000513509 211 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC188H7C350 OR4T1P-201ENST00000554933 911 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC188H7C350 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC188H7C350 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.27□□□□□ -1.89
CCDC188H7C350 AC002545.1-201ENST00000592511 181 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 AC112187.2-201ENST00000604345 283 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 AL162713.1-201ENST00000604480 262 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC188H7C350 AC007038.2-201ENST00000608095 740 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC188H7C350 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 AL138713.1-201ENST00000624026 2130 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 SNORA50A-202ENST00000629536 136 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 ZNF285B-201ENST00000561698 1767 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC188H7C350 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC188H7C350 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC188H7C350 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC188H7C350 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC188H7C350 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CCDC188H7C350 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CCDC188H7C350 AC006378.2-201ENST00000623178 2476 ntBASIC3.26□□□□□ -1.89
CCDC188H7C350 MIR449B-201ENST00000384995 97 ntBASIC3.26□□□□□ -1.89
CCDC188H7C350 MIR325-201ENST00000385260 98 ntBASIC3.26□□□□□ -1.89
CCDC188H7C350 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC188H7C350 SNORA11.1-201ENST00000408133 129 ntBASIC3.26□□□□□ -1.89
CCDC188H7C350 AL445669.1-201ENST00000426743 755 ntBASIC3.26□□□□□ -1.89
CCDC188H7C350 AC018644.1-201ENST00000429934 551 ntBASIC3.26□□□□□ -1.89
CCDC188H7C350 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC188H7C350 AC009237.8-201ENST00000445492 379 ntBASIC3.26□□□□□ -1.89
CCDC188H7C350 AL606662.1-201ENST00000445763 553 ntBASIC3.26□□□□□ -1.89
CCDC188H7C350 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC188H7C350 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC188H7C350 OR5BM1P-201ENST00000512021 366 ntBASIC3.26□□□□□ -1.89
CCDC188H7C350 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC188H7C350 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC188H7C350 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC188H7C350 MIR4506-201ENST00000584693 77 ntBASIC3.26□□□□□ -1.89
CCDC188H7C350 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC188H7C350 NIFKP6-201ENST00000598115 845 ntBASIC3.26□□□□□ -1.89
CCDC188H7C350 AC079089.3-201ENST00000603094 673 ntBASIC3.26□□□□□ -1.89
CCDC188H7C350 AC024220.1-201ENST00000603675 484 ntBASIC3.26□□□□□ -1.89
CCDC188H7C350 SNORA51-201ENST00000606420 132 ntBASIC3.26□□□□□ -1.89
CCDC188H7C350 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC188H7C350 CR392039.5-201ENST00000623201 510 ntBASIC3.26□□□□□ -1.89
CCDC188H7C350 AP000676.3-201ENST00000623299 569 ntBASIC3.26□□□□□ -1.89
CCDC188H7C350 AC027309.3-201ENST00000623419 351 ntBASIC3.26□□□□□ -1.89
CCDC188H7C350 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC188H7C350 OR5H6-203ENST00000642105 978 ntBASIC3.26□□□□□ -1.89
CCDC188H7C350 AC118273.1-201ENST00000525324 3006 ntBASIC3.26□□□□□ -1.89
CCDC188H7C350 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC188H7C350 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
CCDC188H7C350 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
CCDC188H7C350 OR1S2-201ENST00000302592 978 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC188H7C350 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
CCDC188H7C350 SNORA36C-201ENST00000384289 132 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 RNU6-754P-201ENST00000391166 107 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 AC110754.1-201ENST00000399740 601 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 AL109755.1-201ENST00000401791 649 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC188H7C350 RPS27AP14-201ENST00000422868 454 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CCDC188H7C350 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC188H7C350 AL133547.1-201ENST00000448546 220 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 RNU7-125P-201ENST00000458760 62 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 AC008481.1-201ENST00000463278 396 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 RPL32P34-201ENST00000486380 400 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 RPS3AP22-201ENST00000488297 769 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 RPL30P5-201ENST00000494923 336 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 MTCYBP35-201ENST00000503630 1137 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC188H7C350 MTND4LP22-201ENST00000508209 276 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 SNORA31.1-201ENST00000515993 133 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 SNORA31.5-201ENST00000516190 133 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 SCARNA15.2-201ENST00000516409 127 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 SNORD59.2-201ENST00000516873 68 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 RNA5SP291-201ENST00000517222 105 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms