Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RPL17P49-201ENST00000443728 411 ntBASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 RPL36AP33-201ENST00000450395 310 ntBASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 KATNBL1P6-201ENST00000453433 915 ntBASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 MTND2P24-201ENST00000453434 806 ntBASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 RPS27AP1-201ENST00000475545 471 ntBASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 AC055855.1-201ENST00000489563 579 ntBASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 AC020893.1-201ENST00000502452 580 ntBASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 AC107934.2-201ENST00000518653 310 ntBASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 AP006245.1-201ENST00000522549 120 ntBASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 AC091489.2-201ENST00000566263 604 ntBASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 MIR3921-201ENST00000577308 85 ntBASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 MIR3915-201ENST00000578518 97 ntBASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 MIR4276-201ENST00000584832 70 ntBASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 AC068790.3-201ENST00000602988 553 ntBASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 AL109653.1-201ENST00000603091 248 ntBASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 AL162713.1-201ENST00000604480 262 ntBASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 OR10AB1P-201ENST00000609613 938 ntBASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 AP000254.1-201ENST00000609934 520 ntBASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 AC078883.4-201ENST00000623218 367 ntBASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 AC091931.1-201ENST00000623488 728 ntBASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NPIPA3F8WFD2 OR4G2P-202ENST00000641004 1759 ntBASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 AL513302.2-201ENST00000562313 1842 ntBASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 RNU5F-6P-201ENST00000362979 116 ntBASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 SNORA36C-201ENST00000384289 132 ntBASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 AC078974.1-201ENST00000411597 223 ntBASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 RPL7P8-201ENST00000411964 730 ntBASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 RPL7L1P10-201ENST00000427790 463 ntBASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 AC109583.1-201ENST00000432156 268 ntBASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 EPS15P1-201ENST00000448836 336 ntBASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 AC012181.1-201ENST00000479895 423 ntBASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 BET1P1-201ENST00000482276 359 ntBASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 FCF1P3-201ENST00000496394 590 ntBASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 AC007834.2-201ENST00000536310 343 ntBASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 TGIF1P1-201ENST00000558095 802 ntBASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 AC007038.2-201ENST00000608095 740 ntBASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 AC009570.1-201ENST00000609599 745 ntBASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 RNVU1-4-201ENST00000612985 164 ntBASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 TUG1_2.1-201ENST00000614234 87 ntBASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 MIR7112-201ENST00000616126 65 ntBASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 AC068831.7-201ENST00000616954 363 ntBASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 AC110801.1-201ENST00000623590 212 ntBASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 AC008568.2-201ENST00000623862 2313 ntBASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.07□□□□□ -1.92
NPIPA3F8WFD2 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 Y_RNA.46-201ENST00000362695 102 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 MIR19A-201ENST00000384878 82 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 AC006028.1-201ENST00000438379 402 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 MTND1P30-201ENST00000441241 901 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 UBE2D3P4-201ENST00000441973 436 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 AL162389.1-201ENST00000449233 177 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms